Strain identifier
BacDive ID: 163462
Type strain: 
Species: Rhodococcus sp.
Strain history: T. Tateishi; Agency for Cultural Affairs, Japan <-- R. Kigawa and J. Sugiyama; Natl. Res. Inst. for Cult. Prop., Tokyo and TechnoSuruga Lab. Co., Ltd., Japan; T61017-6-2b.
NCBI tax ID(s): 1818691 (species)
General
@ref: 67770
BacDive-ID: 163462
keywords: 16S sequence, mesophilic
description: Rhodococcus sp. JCM 28271 is a mesophilic prokaryote that was isolated from Viscous gels around the paintings of the white tiger on the west wall in the stone chamber.
NCBI tax id
- NCBI tax id: 1818691
- Matching level: species
strain history
- @ref: 67770
- history: T. Tateishi; Agency for Cultural Affairs, Japan <-- R. Kigawa and J. Sugiyama; Natl. Res. Inst. for Cult. Prop., Tokyo and TechnoSuruga Lab. Co., Ltd., Japan; T61017-6-2b.
doi: 10.13145/bacdive163462.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- genus: Rhodococcus
- species: Rhodococcus sp.
- full scientific name: Rhodococcus Zopf 1891 (Approved Lists 1980)
synonyms
@ref synonym 20215 Prescottella 20215 Rhodococcoides 20215 Spelaeibacter 20215 Prescottia
@ref: 67770
domain: Bacteria
phylum: Actinobacteria
class: Actinobacteria
order: Mycobacteriales
family: Nocardiaceae
genus: Rhodococcus
species: Rhodococcus sp.
full scientific name: Rhodococcus sp.
type strain: no
Culture and growth conditions
culture temp
- @ref: 67770
- growth: positive
- type: growth
- temperature: 28
- range: mesophilic
Isolation, sampling and environmental information
isolation
- @ref: 67770
- sample type: Viscous gels around the paintings of the white tiger on the west wall in the stone chamber
- geographic location: Takamatsuzuka Tumulus, Asuka Village, Nara Pref.
- country: Japan
- origin.country: JPN
- continent: Asia
taxonmaps
- @ref: 69479
- File name: preview.99_1118.png
- url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_10;96_181;97_585;98_672;99_1118&stattab=map
- Last taxonomy: Nocardiaceae
- 16S sequence: LC133618
- Sequence Identity:
- Total samples: 28787
- soil counts: 7777
- aquatic counts: 6494
- animal counts: 11681
- plant counts: 2835
Sequence information
16S sequences
- @ref: 67770
- description: Rhodococcus sp. JCM 28271 gene for 16S ribosomal RNA, partial sequence
- accession: LC133618
- length: 1509
- database: ena
- NCBI tax ID: 1818691
External links
@ref: 67770
culture collection no.: JCM 28271
Reference
| @id | authors | title | doi/url |
|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 |
| 67770 | Curators of the JCM | https://jcm.brc.riken.jp/en/ | |
| 69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich. | MicrobeAtlas 1.0 beta | https://microbeatlas.org/ |