Strain identifier
BacDive ID: 16319
Type strain: 
Species: Streptomyces albosporeus subsp. labilomyceticus
Strain history: NIHJ 425 (A955-Y3).
NCBI tax ID(s): 285555 (subspecies)
version 8.1 (current version)
General
@ref: 10455
BacDive-ID: 16319
DSM-Number: 41672
keywords: 16S sequence, Bacteria, mesophilic, antibiotic compound production
description: Streptomyces albosporeus subsp. labilomyceticus DSM 41672 is a mesophilic bacterium that produces antibiotic compounds and was isolated from soil.
NCBI tax id
- NCBI tax id: 285555
- Matching level: subspecies
strain history
| @ref | history |
|---|---|
| 10455 | <- JCM <- NIHJ 425 (A955-Y3) |
| 67770 | NIHJ 425 (A955-Y3). |
doi: 10.13145/bacdive16319.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/actinomycetota
- domain: Bacteria
- phylum: Actinomycetota
- class: Actinomycetes
- order: Kitasatosporales
- family: Streptomycetaceae
- genus: Streptomyces
- species: Streptomyces albosporeus subsp. labilomyceticus
- full scientific name: Streptomyces albosporeus subsp. labilomyceticus Okami et al. 1963 (Approved Lists 1980)
@ref: 10455
domain: Bacteria
phylum: Actinobacteria
class: Actinobacteria
order: Actinomycetales
family: Streptomycetaceae
genus: Streptomyces
species: Streptomyces albosporeus subsp. labilomyceticus
full scientific name: Streptomyces albosporeus subsp. labilomyceticus Okami et al. 1963
type strain: yes
Culture and growth conditions
culture medium
- @ref: 10455
- name: GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)
- growth: yes
- link: https://mediadive.dsmz.de/medium/65
- composition: Name: GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) Composition: Agar 18.0 g/l Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l CaCO3 2.0 g/l Distilled water
culture temp
| @ref | growth | type | temperature | range |
|---|---|---|---|---|
| 10455 | positive | growth | 28 | mesophilic |
| 67770 | positive | growth | 28 | mesophilic |
Physiology and metabolism
compound production
- @ref: 10455
- compound: labilomycin
metabolite production
- @ref: 67770
- metabolite: pulvomycin
- production: yes
Isolation, sampling and environmental information
isolation
| @ref | sample type | geographic location | country | origin.country | continent |
|---|---|---|---|---|---|
| 10455 | soil | Kogoshoma Pref., Akune City, Origuchi | Japan | JPN | Asia |
| 67770 | Soil | Origuchi, Akune City, Kagoshima Pref. | Japan | JPN | Asia |
isolation source categories
- Cat1: #Environmental
- Cat2: #Terrestrial
- Cat3: #Soil
Safety information
risk assessment
- @ref: 10455
- biosafety level: 1
- biosafety level comment: Risk group (German classification)
Sequence information
16S sequences
| @ref | description | accession | length | database | NCBI tax ID |
|---|---|---|---|---|---|
| 20218 | Streptomyces aurantiacus strain JCM 3383 16S ribosomal RNA gene, partial sequence | AY999755 | 1407 | ena | 47760 |
| 20218 | Streptomyces albosporeus subsp. labilomyceticus gene for 16S rRNA, partial sequence, strain: NBRC 15387 | AB184638 | 1441 | ena | 285555 |
| 67770 | Streptomyces albosporeus subsp. labilomyceticus strain NRRL B-24296 16S ribosomal RNA gene, partial sequence | EF626593 | 1493 | ena | 285555 |
External links
@ref: 10455
culture collection no.: DSM 41672, JCM 3383, CGMCC 4.1618, IFO 15387, KCTC 9666, NBRC 15387
straininfo link
- @ref: 85375
- straininfo: 50049
literature
- topic: Phylogeny
- Pubmed-ID: 26330377
- title: Streptomyces bambusae sp. nov., Showing Antifungal and Antibacterial Activities, Isolated from Bamboo (Bambuseae) Rhizosphere Soil Using a Modified Culture Method.
- authors: Nguyen TM, Kim J
- journal: Curr Microbiol
- DOI: 10.1007/s00284-015-0899-2
- year: 2015
- mesh: Amino Acids/analysis, Bacterial Typing Techniques, Bambusa/*growth & development, Cell Wall/chemistry, Cluster Analysis, Cytosol/chemistry, DNA, Bacterial/chemistry/genetics, DNA, Ribosomal/chemistry/genetics, Fatty Acids/analysis, Microscopy, Electron, Scanning, Molecular Sequence Data, Nucleic Acid Hybridization, Peptidoglycan/analysis, Phospholipids/analysis, Phylogeny, RNA, Ribosomal, 16S/genetics, Republic of Korea, *Rhizosphere, Sequence Analysis, DNA, *Soil Microbiology, Streptomyces/*classification/genetics/*isolation & purification/physiology, Vitamin K 2/analysis
- topic2: Genetics
Reference
| @id | authors | catalogue | doi/url | title | journal | pubmed |
|---|---|---|---|---|---|---|
| 10455 | Curators of the DSMZ | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 41672) | https://www.dsmz.de/collection/catalogue/details/culture/DSM-41672 | |||
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | 10.1099/ijsem.0.004332 | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | |||
| 20218 | Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P. | 10.1016/j.syapm.2013.11.002 | StrainInfo introduces electronic passports for microorganisms. | Syst Appl Microbiol. 37: 42-50 2014 | 24321274 | |
| 67770 | Curators of the JCM | https://jcm.brc.riken.jp/en/ | ||||
| 85375 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | 10.60712/SI-ID50049.1 | StrainInfo: A central database for resolving microbial strain identifiers |