Strain identifier
BacDive ID: 163056
Type strain: 
Species: Myxococcus stipitatus
Strain history: IAM 13955 <-- S. Yamanaka No. 18 (=AJ 12376).
NCBI tax ID(s): 83455 (species)
version 9 (current version)
General
@ref: 67770
BacDive-ID: 163056
keywords: 16S sequence, Bacteria
description: Myxococcus stipitatus JCM 21003 is a bacterium that was isolated from Forest soil.
NCBI tax id
- NCBI tax id: 83455
- Matching level: species
strain history
- @ref: 67770
- history: IAM 13955 <-- S. Yamanaka No. 18 (=AJ 12376).
doi: 10.13145/bacdive163056.20240510.9
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/pseudomonadota
- domain: Bacteria
- phylum: Pseudomonadota
- class: Deltaproteobacteria
- order: Myxococcales
- family: Myxococcaceae
- genus: Myxococcus
- species: Myxococcus stipitatus
- full scientific name: Myxococcus stipitatus Thaxter 1897 (Approved Lists 1980)
@ref: 67770
domain: Bacteria
phylum: Proteobacteria
class: Deltaproteobacteria
order: Myxococcales
family: Myxococcaceae
genus: Myxococcus
species: Myxococcus stipitatus
full scientific name: Myxococcus stipitatus Thaxter 1897
type strain: no
Culture and growth conditions
culture temp
- @ref: 67770
- growth: positive
- type: growth
- temperature: 30
Isolation, sampling and environmental information
isolation
- @ref: 67770
- sample type: Forest soil
Sequence information
16S sequences
| @ref | description | accession | length | database | NCBI tax ID |
|---|---|---|---|---|---|
| 124043 | Myxococcus stipitatus gene for 16S rRNA, partial sequence, strain: NBRC 100068. | AB218207 | 1461 | nuccore | 83455 |
| 124043 | Myxococcus stipitatus gene for 16S-23S rRNA internal transcribed spacer regions, partial sequence, strain: NBRC 100068. | AB218237 | 736 | nuccore | 83455 |
External links
@ref: 67770
culture collection no.: JCM 21003, AJ 12376, IAM 13955, NBRC 100068
straininfo link
- @ref: 113824
- straininfo: 200042
Reference
| @id | authors | title | doi/url |
|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 |
| 67770 | Curators of the JCM | https://jcm.brc.riken.jp/en/ | |
| 113824 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | StrainInfo: A central database for resolving microbial strain identifiers | 10.60712/SI-ID200042.1 |
| 124043 | Dr. Isabel Schober, Dr. Julia Koblitz | Data extracted from sequence databases, automatically matched based on designation and taxonomy |