Strain identifier
BacDive ID: 163048
Type strain: 
Species: Agrobacterium radiobacter
Strain history: IAM 13940 <-- LMG 332 <-- G. Heberlein T37.
NCBI tax ID(s): 362 (species)
version 9 (current version)
General
@ref: 67770
BacDive-ID: 163048
keywords: 16S sequence, Bacteria
description: Agrobacterium radiobacter JCM 20991 is a bacterium that was isolated from Walnut gall.
NCBI tax id
- NCBI tax id: 362
- Matching level: species
strain history
- @ref: 67770
- history: IAM 13940 <-- LMG 332 <-- G. Heberlein T37.
doi: 10.13145/bacdive163048.20240510.9
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/pseudomonadota
- domain: Bacteria
- phylum: Pseudomonadota
- class: Alphaproteobacteria
- order: Hyphomicrobiales
- family: Rhizobiaceae
- genus: Agrobacterium
- species: Agrobacterium radiobacter
- full scientific name: Agrobacterium radiobacter (Beijerinck and van Delden 1902) Conn 1942 (Approved Lists 1980)
synonyms
@ref synonym 20215 Bacillus radiobacter 20215 Rhizobium radiobacter 20215 Beijerinckia fluminensis
@ref: 67770
domain: Bacteria
phylum: Proteobacteria
class: Alphaproteobacteria
order: Hyphomicrobiales
family: Rhizobiaceae
genus: Rhizobium
species: Rhizobium radiobacter
full scientific name: Rhizobium radiobacter (Beijerinck and van Delden 1902) Young et al. 2001
type strain: no
Culture and growth conditions
culture temp
- @ref: 67770
- growth: positive
- type: growth
- temperature: 25
Isolation, sampling and environmental information
isolation
- @ref: 67770
- sample type: Walnut gall
- geographic location: CA
- country: USA
- origin.country: USA
- continent: North America
taxonmaps
- @ref: 69479
- File name: preview.99_34.png
- url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_5;96_6;97_6;98_6;99_34&stattab=map
- Last taxonomy: Agrobacterium
- 16S sequence: AJ389906
- Sequence Identity:
- Total samples: 17
- soil counts: 6
- animal counts: 6
- plant counts: 5
Sequence information
16S sequences
- @ref: 67770
- description: Agrobacterium tumefaciens 16S rRNA gene, strain ICPB T37
- accession: AJ389906
- length: 1437
- database: nuccore
- NCBI tax ID: 358
External links
@ref: 67770
culture collection no.: JCM 20991, IAM 13940, LMG 332
straininfo link
- @ref: 113816
- straininfo: 662
Reference
| @id | authors | title | doi/url |
|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 |
| 67770 | Curators of the JCM | https://jcm.brc.riken.jp/en/ | |
| 69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich. | MicrobeAtlas 1.0 beta | https://microbeatlas.org/ |
| 113816 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | StrainInfo: A central database for resolving microbial strain identifiers | 10.60712/SI-ID662.1 |