Strain identifier
BacDive ID: 162827
Type strain: 
Species: Tetragenococcus halophilus
Strain history: IAM 1686 <-- K. Sakaguchi d-4 ("Pediococcus soyae").
NCBI tax ID(s): 51669 (species)
version 9 (current version)
General
@ref: 67770
BacDive-ID: 162827
keywords: 16S sequence, Bacteria
description: Tetragenococcus halophilus JCM 20255 is a bacterium that was isolated from Soy sauce brewing mashes.
NCBI tax id
- NCBI tax id: 51669
- Matching level: species
strain history
- @ref: 67770
- history: IAM 1686 <-- K. Sakaguchi d-4 ("Pediococcus soyae").
doi: 10.13145/bacdive162827.20240510.9
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/bacillota
- domain: Bacteria
- phylum: Bacillota
- class: Bacilli
- order: Lactobacillales
- family: Enterococcaceae
- genus: Tetragenococcus
- species: Tetragenococcus halophilus
- full scientific name: Tetragenococcus halophilus (Mees 1934) Collins et al. 1993
synonyms
- @ref: 20215
- synonym: Pediococcus halophilus
@ref: 67770
domain: Bacteria
phylum: Firmicutes
class: Bacilli
order: Lactobacillales
family: Enterococcaceae
genus: Tetragenococcus
species: Tetragenococcus halophilus
full scientific name: Tetragenococcus halophilus (Mees 1934) Collins et al. 1993
type strain: no
Culture and growth conditions
culture temp
- @ref: 67770
- growth: positive
- type: growth
- temperature: 30
Isolation, sampling and environmental information
isolation
- @ref: 67770
- sample type: Soy sauce brewing mashes
taxonmaps
- @ref: 69479
- File name: preview.99_261.png
- url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_13;96_184;97_200;98_223;99_261&stattab=map
- Last taxonomy: Tetragenococcus halophilus
- 16S sequence: AB911551
- Sequence Identity:
- Total samples: 23236
- soil counts: 861
- aquatic counts: 1678
- animal counts: 20165
- plant counts: 532
Sequence information
16S sequences
- @ref: 67770
- description: Tetragenococcus halophilus gene for 16S rRNA, partial sequence, strain: JCM 20255
- accession: AB911551
- length: 1522
- database: nuccore
- NCBI tax ID: 51669
External links
@ref: 67770
culture collection no.: JCM 20255, IAM 1686, NISL 7120
straininfo link
- @ref: 113633
- straininfo: 219120
Reference
| @id | authors | title | doi/url |
|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 |
| 67770 | Curators of the JCM | https://jcm.brc.riken.jp/en/ | |
| 69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich. | MicrobeAtlas 1.0 beta | https://microbeatlas.org/ |
| 113633 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | StrainInfo: A central database for resolving microbial strain identifiers | 10.60712/SI-ID219120.1 |