Strain identifier
BacDive ID: 162804
Type strain: 
Species: Pseudomonas putida
Strain history: IAM 1506 <-- ATCC 4359 <-- A. Stewart.
NCBI tax ID(s): 303 (species)
version 8.1 (current version)
General
@ref: 67770
BacDive-ID: 162804
keywords: 16S sequence, Bacteria, mesophilic
description: Pseudomonas putida JCM 20188 is a mesophilic bacterium of the family Pseudomonadaceae.
NCBI tax id
- NCBI tax id: 303
- Matching level: species
strain history
- @ref: 67770
- history: IAM 1506 <-- ATCC 4359 <-- A. Stewart.
doi: 10.13145/bacdive162804.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/pseudomonadota
- domain: Bacteria
- phylum: Pseudomonadota
- class: Gammaproteobacteria
- order: Pseudomonadales
- family: Pseudomonadaceae
- genus: Pseudomonas
- species: Pseudomonas putida
- full scientific name: Pseudomonas putida (Trevisan 1889) Migula 1895 (Approved Lists 1980)
synonyms
@ref synonym 20215 Bacillus putidus 20215 Arthrobacter siderocapsulatus
@ref: 67770
domain: Bacteria
phylum: Proteobacteria
class: Gammaproteobacteria
order: Pseudomonadales
family: Pseudomonadaceae
genus: Pseudomonas
species: Pseudomonas putida
full scientific name: Pseudomonas putida (Trevisan 1889) Migula 1895
type strain: no
Culture and growth conditions
culture temp
- @ref: 67770
- growth: positive
- type: growth
- temperature: 25
- range: mesophilic
Isolation, sampling and environmental information
taxonmaps
- @ref: 69479
- File name: preview.99_863.png
- url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_23;96_61;97_89;98_203;99_863&stattab=map
- Last taxonomy: Pseudomonas
- 16S sequence: LC595320
- Sequence Identity:
- Total samples: 1972
- soil counts: 444
- aquatic counts: 421
- animal counts: 802
- plant counts: 305
Sequence information
16S sequences
- @ref: 67770
- description: Pseudomonas putida JCM:20188 gene for 16S rRNA, partial sequence
- accession: LC595320
- length: 1459
- database: ena
- NCBI tax ID: 303
External links
@ref: 67770
culture collection no.: JCM 20188, ATCC 4359, IAM 1506
straininfo link
- @ref: 113613
- straininfo: 34709
literature
- topic: Metabolism
- Pubmed-ID: 21455592
- title: Synthesis of a citrulline-rich cyanophycin by use of Pseudomonas putida ATCC 4359.
- authors: Wiefel L, Broker A, Steinbuchel A
- journal: Appl Microbiol Biotechnol
- DOI: 10.1007/s00253-011-3224-4
- year: 2011
- mesh: Bacterial Proteins/genetics/*metabolism, Citrulline/*metabolism, Peptide Synthases/genetics/metabolism, Pseudomonas putida/genetics/*metabolism, Synechocystis/enzymology
- topic2: Enzymology
Reference
| @id | authors | title | doi/url |
|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 |
| 67770 | Curators of the JCM | https://jcm.brc.riken.jp/en/ | |
| 69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich. | MicrobeAtlas 1.0 beta | https://microbeatlas.org/ |
| 113613 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | StrainInfo: A central database for resolving microbial strain identifiers | 10.60712/SI-ID34709.1 |