Strain identifier
BacDive ID: 162687
Type strain:
Species: Pseudomonas aeruginosa
Strain history: IAM 1007 <-- RIMD, MT.
NCBI tax ID(s): 287 (species)
version 8.1 (current version)
General
@ref: 67770
BacDive-ID: 162687
keywords: 16S sequence, Bacteria, mesophilic
description: Pseudomonas aeruginosa JCM 20006 is a mesophilic bacterium of the family Pseudomonadaceae.
NCBI tax id
- NCBI tax id: 287
- Matching level: species
strain history
- @ref: 67770
- history: IAM 1007 <-- RIMD, MT.
doi: 10.13145/bacdive162687.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/pseudomonadota
- domain: Bacteria
- phylum: Pseudomonadota
- class: Gammaproteobacteria
- order: Pseudomonadales
- family: Pseudomonadaceae
- genus: Pseudomonas
- species: Pseudomonas aeruginosa
- full scientific name: Pseudomonas aeruginosa (Schroeter 1872) Migula 1900 (Approved Lists 1980)
synonyms
- @ref: 20215
- synonym: Bacterium aeruginosum
@ref: 67770
domain: Bacteria
phylum: Proteobacteria
class: Gammaproteobacteria
order: Pseudomonadales
family: Pseudomonadaceae
genus: Pseudomonas
species: Pseudomonas aeruginosa
full scientific name: Pseudomonas aeruginosa (Schroeter 1872) Migula 1900
type strain: no
Culture and growth conditions
culture temp
- @ref: 67770
- growth: positive
- type: growth
- temperature: 37
- range: mesophilic
Isolation, sampling and environmental information
taxonmaps
- @ref: 69479
- File name: preview.99_42.png
- url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_23;96_36;97_37;98_40;99_42&stattab=map
- Last taxonomy: Pseudomonas aeruginosa
- 16S sequence: LC571913
- Sequence Identity:
- Total samples: 22757
- soil counts: 1669
- aquatic counts: 5046
- animal counts: 14748
- plant counts: 1294
Sequence information
16S sequences
- @ref: 67770
- description: Pseudomonas aeruginosa JCM 20006 gene for 16S rRNA, partial sequence
- accession: LC571913
- length: 1458
- database: ena
- NCBI tax ID: 287
External links
@ref: 67770
culture collection no.: JCM 20006, IAM 1007, OUT 8135
straininfo link
- @ref: 113519
- straininfo: 218852
literature
topic | Pubmed-ID | title | authors | journal | DOI | year | mesh |
---|---|---|---|---|---|---|---|
Pathogenicity | 3095954 | Electron microscopic study of the cell surface of dibekacin-treated Pseudomonas aeruginosa. | Aonuma S, Ariji F, Oizumi K, Konno K | Tohoku J Exp Med | 10.1620/tjem.150.69 | 1986 | Cell Membrane/ultrastructure, Cell Nucleus/ultrastructure, Cell Wall/ultrastructure, Cytoplasm/ultrastructure, Dibekacin/*pharmacology, Kanamycin/*analogs & derivatives, Microscopy, Electron, Pseudomonas aeruginosa/drug effects/*ultrastructure |
Pathogenicity | 3114912 | Electron microscopy of Pseudomonas aeruginosa treated with sulbenicillin and dibekacin. | Aonuma S, Ariji F, Oizumi K, Konno K | Tohoku J Exp Med | 10.1620/tjem.152.119 | 1987 | Cell Wall/drug effects, Dibekacin/administration & dosage/*pharmacology, Drug Synergism, Kanamycin/*analogs & derivatives, Microscopy, Electron, Penicillin G/*analogs & derivatives, Pseudomonas aeruginosa/*drug effects/ultrastructure, Sulbenicillin/administration & dosage/*pharmacology |
Reference
@id | authors | title | doi/url |
---|---|---|---|
20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 |
67770 | Curators of the JCM | https://jcm.brc.riken.jp/en/ | |
69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich. | MicrobeAtlas 1.0 beta | https://microbeatlas.org/ |
113519 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | StrainInfo: A central database for resolving microbial strain identifiers | 10.60712/SI-ID218852.1 |