Strain identifier
BacDive ID: 162573
Type strain: 
Species: Lysinibacillus halotolerans
Strain history: Z. Ruan; Inst. of Agric. Resour. & Reg. Plann., CAAS, China; LAM612.
NCBI tax ID(s): 1368476 (species)
version 8.1 (current version)
General
@ref: 67770
BacDive-ID: 162573
keywords: 16S sequence, Bacteria, mesophilic
description: Lysinibacillus halotolerans JCM 19611 is a mesophilic bacterium that was isolated from Saline-alkaline soil from Lingxian County.
NCBI tax id
- NCBI tax id: 1368476
- Matching level: species
strain history
- @ref: 67770
- history: Z. Ruan; Inst. of Agric. Resour. & Reg. Plann., CAAS, China; LAM612.
doi: 10.13145/bacdive162573.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/bacillota
- domain: Bacteria
- phylum: Bacillota
- class: Bacilli
- order: Caryophanales
- family: Caryophanaceae
- genus: Lysinibacillus
- species: Lysinibacillus halotolerans
- full scientific name: Lysinibacillus halotolerans Kong et al. 2014
synonyms
- @ref: 20215
- synonym: Ureibacillus halotolerans
@ref: 67770
domain: Bacteria
phylum: Firmicutes
class: Bacilli
order: Caryophanales
family: Caryophanaceae
genus: Lysinibacillus
species: Lysinibacillus halotolerans
full scientific name: Lysinibacillus halotolerans Kong et al. 2014
type strain: yes
Culture and growth conditions
culture temp
- @ref: 67770
- growth: positive
- type: growth
- temperature: 35
- range: mesophilic
Physiology and metabolism
observation
- @ref: 67770
- observation: quinones: MK-7
Isolation, sampling and environmental information
isolation
- @ref: 67770
- sample type: Saline-alkaline soil from Lingxian County
- geographic location: Shandong Province
- country: China
- origin.country: CHN
- continent: Asia
taxonmaps
- @ref: 69479
- File name: preview.99_42729.png
- url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_3;96_3452;97_5123;98_6520;99_42729&stattab=map
- Last taxonomy: Lysinibacillus halotolerans
- 16S sequence: KF443809
- Sequence Identity:
- Total samples: 104
- soil counts: 61
- aquatic counts: 5
- animal counts: 21
- plant counts: 17
Sequence information
16S sequences
- @ref: 67770
- description: Lysinibacillus halotolerans strain LAM612 16S ribosomal RNA gene, partial sequence
- accession: KF443809
- length: 1430
- database: ena
- NCBI tax ID: 1368476
GC content
- @ref: 67770
- GC-content: 36.4
- method: thermal denaturation, midpoint method (Tm)
External links
@ref: 67770
culture collection no.: JCM 19611, ACCC 00718
literature
| topic | Pubmed-ID | title | authors | journal | DOI | year | mesh | topic2 |
|---|---|---|---|---|---|---|---|---|
| Phylogeny | 24814335 | Lysinibacillus halotolerans sp. nov., isolated from saline-alkaline soil. | Kong D, Wang Y, Zhao B, Li Y, Song J, Zhai Y, Zhang C, Wang H, Chen X, Zhao B, Ruan Z | Int J Syst Evol Microbiol | 10.1099/ijs.0.061465-0 | 2014 | Bacillaceae/*classification/genetics/isolation & purification, Bacterial Typing Techniques, Base Composition, China, DNA, Bacterial/genetics, Fatty Acids/chemistry, Glycolipids/chemistry, Molecular Sequence Data, Nucleic Acid Hybridization, Peptidoglycan/chemistry, Phospholipids/chemistry, *Phylogeny, RNA, Ribosomal, 16S/genetics, Sequence Analysis, DNA, *Soil Microbiology, Vitamin K 2/analogs & derivatives/chemistry | Genetics |
| Phylogeny | 28699866 | Description of Lysinibacillus telephonicus sp. nov., isolated from the screen of a cellular phone. | Rahi P, Kurli R, Khairnar M, Jagtap S, Pansare AN, Dastager SG, Shouche YS | Int J Syst Evol Microbiol | 10.1099/ijsem.0.001943 | 2017 | Bacillaceae/*classification/genetics/isolation & purification, Bacterial Typing Techniques, Base Composition, *Cell Phone, Cell Wall/chemistry, DNA, Bacterial/genetics, Fatty Acids/chemistry, India, Nucleic Acid Hybridization, Peptidoglycan/chemistry, Phospholipids/chemistry, *Phylogeny, RNA, Ribosomal, 16S/genetics, Sequence Analysis, DNA | Transcriptome |
Reference
| @id | authors | title | doi/url |
|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 |
| 67770 | Curators of the JCM | https://jcm.brc.riken.jp/en/ | |
| 69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich. | MicrobeAtlas 1.0 beta | https://microbeatlas.org/ |