General

@ref: 67770

BacDive-ID: 162405

keywords: 16S sequence, Bacteria

description: Nesterenkonia rhizosphaerae JCM 19129 is a bacterium that was isolated from Rhizosphere soil of Reaumuria soongorica in the desert soils of Fukang.

NCBI tax id

• NCBI tax id: 1348272
• Matching level: species

strain history

• @ref: 67770
• history: W.-J. Li EGI 80099.

doi: 10.13145/bacdive162405.20240510.9

Name and taxonomic classification

LPSN

• @ref: 20215
• description: domain/bacteria
• keyword: phylum/actinomycetota
• domain: Bacteria
• phylum: Actinomycetota
• class: Actinomycetes
• order: Micrococcales
• family: Micrococcaceae
• genus: Nesterenkonia
• species: Nesterenkonia rhizosphaerae
• full scientific name: Nesterenkonia rhizosphaerae Wang et al. 2014

@ref: 67770

domain: Bacteria

phylum: Actinobacteria

class: Actinobacteria

order: Micrococcales

family: Micrococcaceae

genus: Nesterenkonia

species: Nesterenkonia rhizosphaerae

full scientific name: Nesterenkonia rhizosphaerae Wang et al. 2014

type strain: yes

Culture and growth conditions

culture temp

• @ref: 67770
• growth: positive
• type: growth
• temperature: 37

Physiology and metabolism

observation

• @ref: 67770
• observation: quinones: MK-7, MK-8, MK-9

Isolation, sampling and environmental information

isolation

• @ref: 67770
• sample type: Rhizosphere soil of Reaumuria soongorica in the desert soils of Fukang
• host species: Reaumuria soongorica
• geographic location: Xinjiang, north-west China
• country: China
• origin.country: CHN
• continent: Asia

taxonmaps

• @ref: 69479
• File name: preview.99_3130.png
• url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_9;96_1530;97_1952;98_2401;99_3130&stattab=map
• Last taxonomy: Nesterenkonia
• 16S sequence: KF040423
• Sequence Identity:
• Total samples: 1276
• soil counts: 81
• aquatic counts: 167
• animal counts: 1013
• plant counts: 15

Sequence information

16S sequences

• @ref: 67770
• description: Nesterenkonia rhizosphaerae strain EGI 80099 16S ribosomal RNA gene, partial sequence
• accession: KF040423
• length: 1520
• database: nuccore
• NCBI tax ID: 1348272

GC content

• @ref: 67770
• GC-content: 63.4
• method: high performance liquid chromatography (HPLC)

External links

@ref: 67770

culture collection no.: JCM 19129, BCRC 16947

literature

• topic: Phylogeny
• Pubmed-ID: 25225260
• title: Nesterenkonia rhizosphaerae sp. nov., an alkaliphilic actinobacterium isolated from rhizosphere soil in a saline-alkaline desert.
• authors: Wang HF, Zhang YG, Chen JY, Hozzein WN, Li L, Wadaan MAM, Zhang YM, Li WJ
• journal: Int J Syst Evol Microbiol
• DOI: 10.1099/ijs.0.066894-0
• year: 2014
• mesh: Bacterial Typing Techniques, Base Composition, China, DNA, Bacterial/genetics, *Desert Climate, Fatty Acids/chemistry, Micrococcaceae/*classification/genetics/isolation & purification, Molecular Sequence Data, Nucleic Acid Hybridization, Peptidoglycan/chemistry, *Phylogeny, RNA, Ribosomal, 16S/genetics, *Rhizosphere, Sequence Analysis, DNA, *Soil Microbiology, Vitamin K 2/chemistry
• topic2: Genetics

Reference