General

@ref: 67770

BacDive-ID: 162306

keywords: 16S sequence, Bacteria, mesophilic

description: Xanthomarina gelatinilytica JCM 18821 is a mesophilic bacterium that was isolated from Seawater collected from Kochi City.

NCBI tax id

• NCBI tax id: 1137281
• Matching level: species

strain history

• @ref: 67770
• history: P. Anil Kumar AK20.

doi: 10.13145/bacdive162306.20230509.8.1

Name and taxonomic classification

LPSN

• @ref: 20215
• description: domain/bacteria
• keyword: phylum/bacteroidota
• domain: Bacteria
• phylum: Bacteroidota
• class: Flavobacteriia
• order: Flavobacteriales
• family: Flavobacteriaceae
• genus: Xanthomarina
• species: Xanthomarina gelatinilytica
• full scientific name: Xanthomarina gelatinilytica Vaidya et al. 2015

@ref: 67770

domain: Bacteria

phylum: Bacteroidetes

class: Flavobacteriia

order: Flavobacteriales

family: Flavobacteriaceae

genus: Xanthomarina

species: Xanthomarina gelatinilytica

full scientific name: Xanthomarina gelatinilytica Vaidya et al. 2015

type strain: yes

Culture and growth conditions

culture temp

• @ref: 67770
• growth: positive
• type: growth
• temperature: 30
• range: mesophilic

Physiology and metabolism

observation

• @ref: 67770
• observation: quinones: MK-6

Isolation, sampling and environmental information

isolation

• @ref: 67770
• sample type: Seawater collected from Kochi City
• geographic location: Kerala State
• country: India
• origin.country: IND
• continent: Asia

taxonmaps

• @ref: 69479
• File name: preview.99_3524.png
• url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_107;96_1833;97_2202;98_2701;99_3524&stattab=map
• Last taxonomy: Flavobacteriaceae
• 16S sequence: HE653972
• Sequence Identity:
• Total samples: 1479
• soil counts: 98
• aquatic counts: 933
• animal counts: 424
• plant counts: 24

Sequence information

16S sequences

• @ref: 67770
• description: Xanthomarina gelatinilytica partial 16S rRNA gene, type strain AK20T
• accession: HE653972
• length: 1461
• database: ena
• NCBI tax ID: 1137281

GC content

• @ref: 67770
• GC-content: 38.8
• method: thermal denaturation, midpoint method (Tm)

External links

@ref: 67770

culture collection no.: JCM 18821, MTCC 11705

literature

• topic: Phylogeny
• Pubmed-ID: 26956595
• title: Xanthomarina gelatinilytica gen. nov., sp. nov., isolated from seawater.
• authors: Vaidya B, Kumar R, Sharma G, Srinivas TNR, Anil Kumar P
• journal: Int J Syst Evol Microbiol
• DOI: 10.1099/ijsem.0.000515
• year: 2015
• mesh: Bacterial Typing Techniques, Base Composition, DNA, Bacterial/genetics, Fatty Acids/chemistry, Flavobacteriaceae/*classification/genetics/isolation & purification, India, Molecular Sequence Data, Phospholipids/chemistry, *Phylogeny, Pigmentation, RNA, Ribosomal, 16S/genetics, Seawater/*microbiology, Sequence Analysis, DNA, Vitamin K 2/analogs & derivatives/chemistry
• topic2: Genetics

Reference