Strain identifier

BacDive ID: 162221

Type strain: Yes

Species: Flaviramulus aquimarinus

Strain history: C. N. Seong KYW499.

NCBI tax ID(s): 1170456 (species)

For citation purpose refer to the digital object identifier (doi) of the current version.
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General

@ref: 67770

BacDive-ID: 162221

keywords: 16S sequence, Bacteria

description: Flaviramulus aquimarinus JCM 18274 is a bacterium that was isolated from Seawater of Suncheon Bay.

NCBI tax id

  • NCBI tax id: 1170456
  • Matching level: species

strain history

  • @ref: 67770
  • history: C. N. Seong KYW499.

doi: 10.13145/bacdive162221.20240510.9

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/bacteroidota
  • domain: Bacteria
  • phylum: Bacteroidota
  • class: Flavobacteriia
  • order: Flavobacteriales
  • family: Flavobacteriaceae
  • genus: Flaviramulus
  • species: Flaviramulus aquimarinus
  • full scientific name: Flaviramulus aquimarinus Lee et al. 2015

@ref: 67770

domain: Bacteria

phylum: Bacteroidetes

class: Flavobacteriia

order: Flavobacteriales

family: Flavobacteriaceae

genus: Flaviramulus

species: Flaviramulus aquimarinus

full scientific name: Flaviramulus aquimarinus Lee et al. 2015

type strain: yes

Culture and growth conditions

culture temp

  • @ref: 67770
  • growth: positive
  • type: growth
  • temperature: 25

Isolation, sampling and environmental information

isolation

  • @ref: 67770
  • sample type: Seawater of Suncheon Bay
  • country: Republic of Korea
  • origin.country: KOR
  • continent: Asia

taxonmaps

  • @ref: 69479
  • File name: preview.99_23584.png
  • url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_107;96_1821;97_14379;98_17757;99_23584&stattab=map
  • Last taxonomy: Flaviramulus aquimarinus subclade
  • 16S sequence: JQ687104
  • Sequence Identity:
  • Total samples: 331
  • soil counts: 1
  • aquatic counts: 324
  • animal counts: 5
  • plant counts: 1

Sequence information

16S sequences

  • @ref: 67770
  • description: Flaviramulus aquimarinus strain KYW499 16S ribosomal RNA gene, partial sequence
  • accession: JQ687104
  • length: 1452
  • database: nuccore
  • NCBI tax ID: 1170456

External links

@ref: 67770

culture collection no.: JCM 18274, KCTC 23924

literature

  • topic: Phylogeny
  • Pubmed-ID: 25413878
  • title: Flaviramulus aquimarinus sp. nov., isolated from seawater.
  • authors: Lee JH, Baik KS, Seong CN
  • journal: Int J Syst Evol Microbiol
  • DOI: 10.1099/ijs.0.066126-0
  • year: 2014
  • mesh: Bacterial Typing Techniques, Base Composition, DNA, Bacterial/genetics, Fatty Acids/chemistry, Flavobacteriaceae/*classification/genetics/isolation & purification, Molecular Sequence Data, Phosphatidylethanolamines/chemistry, *Phylogeny, Pigmentation, RNA, Ribosomal, 16S/genetics, Republic of Korea, Seawater/*microbiology, Sequence Analysis, DNA, Vitamin K 2/analogs & derivatives/chemistry
  • topic2: Genetics

Reference

@idauthorstitledoi/url
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
67770Curators of the JCMhttps://jcm.brc.riken.jp/en/
69479João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.MicrobeAtlas 1.0 betahttps://microbeatlas.org/