Strain identifier
BacDive ID: 162187
Type strain: 
Species: Cohnella humi
Strain history: S.-S. Lee; Kyonggi Univ., South Korea; J20-3.
NCBI tax ID(s): 1312134 (species)
version 8.1 (current version)
General
@ref: 67770
BacDive-ID: 162187
keywords: 16S sequence, Bacteria, mesophilic
description: Cohnella humi JCM 18164 is a mesophilic bacterium that was isolated from Peat soil collected near a coal mine at Prokopyevsk.
NCBI tax id
- NCBI tax id: 1312134
- Matching level: species
strain history
- @ref: 67770
- history: S.-S. Lee; Kyonggi Univ., South Korea; J20-3.
doi: 10.13145/bacdive162187.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/bacillota
- domain: Bacteria
- phylum: Bacillota
- class: Bacilli
- order: Caryophanales
- family: Paenibacillaceae
- genus: Cohnella
- species: Cohnella humi
- full scientific name: Cohnella humi Nguyen and Lee 2014
@ref: 67770
domain: Bacteria
phylum: Firmicutes
class: Bacilli
order: Caryophanales
family: Paenibacillaceae
genus: Cohnella
species: Cohnella humi
full scientific name: Cohnella humi Nguyen and Lee
type strain: yes
Culture and growth conditions
culture temp
- @ref: 67770
- growth: positive
- type: growth
- temperature: 30
- range: mesophilic
Physiology and metabolism
observation
- @ref: 67770
- observation: quinones: MK-7
Isolation, sampling and environmental information
isolation
- @ref: 67770
- sample type: Peat soil collected near a coal mine at Prokopyevsk
- geographic location: Kemerovo Oblast
- country: Russia
- origin.country: RUS
taxonmaps
- @ref: 69479
- File name: preview.99_87455.png
- url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_15358;96_36324;97_46156;98_60450;99_87455&stattab=map
- Last taxonomy: Cohnella humi subclade
- 16S sequence: KC733177
- Sequence Identity:
- Total samples: 16
- soil counts: 10
- aquatic counts: 1
- animal counts: 3
- plant counts: 2
Sequence information
16S sequences
- @ref: 67770
- description: Cohnella humi 16S ribosomal RNA gene, partial sequence
- accession: KC733177
- length: 1487
- database: ena
- NCBI tax ID: 1312134
GC content
- @ref: 67770
- GC-content: 56.3
- method: high performance liquid chromatography (HPLC)
External links
@ref: 67770
culture collection no.: JCM 18164, KEMC 5401-256
Reference
| @id | authors | title | doi/url |
|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 |
| 67770 | Curators of the JCM | https://jcm.brc.riken.jp/en/ | |
| 69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich. | MicrobeAtlas 1.0 beta | https://microbeatlas.org/ |