General

@ref: 67770

BacDive-ID: 162076

keywords: 16S sequence, Bacteria

description: Albirhodobacter marinus JCM 17680 is a bacterium that was isolated from Marine water collected from sea shore of Visakhapatnam.

NCBI tax id

• NCBI tax id: 992290
• Matching level: species

strain history

• @ref: 67770
• history: P. Anil Kumar N9.

doi: 10.13145/bacdive162076.20240510.9

Name and taxonomic classification

LPSN

• @ref: 20215
• description: domain/bacteria
• keyword: phylum/pseudomonadota
• domain: Bacteria
• phylum: Pseudomonadota
• class: Alphaproteobacteria
• order: Rhodobacterales
• family: Paracoccaceae
• genus: Albirhodobacter
• species: Albirhodobacter marinus
• full scientific name: Albirhodobacter marinus Nupur et al. 2015

@ref: 67770

domain: Bacteria

phylum: Proteobacteria

class: Alphaproteobacteria

order: Rhodobacterales

family: Rhodobacteraceae

genus: Albirhodobacter

species: Albirhodobacter marinus

full scientific name: Albirhodobacter marinus Nupur et al. 2015

type strain: yes

Culture and growth conditions

culture temp

• @ref: 67770
• growth: positive
• type: growth
• temperature: 30

Physiology and metabolism

observation

• @ref: 67770
• observation: quinones: Q-10

Isolation, sampling and environmental information

isolation

• @ref: 67770
• sample type: Marine water collected from sea shore of Visakhapatnam
• geographic location: Andhra Pradesh
• country: India
• origin.country: IND
• continent: Asia

taxonmaps

• @ref: 69479
• File name: preview.99_48024.png
• url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_19;96_21774;97_27181;98_34620;99_48024&stattab=map
• Last taxonomy: Albirhodobacter
• 16S sequence: FR827899
• Sequence Identity:
• Total samples: 21994
• soil counts: 2278
• aquatic counts: 16065
• animal counts: 2891
• plant counts: 760

Sequence information

16S sequences

• @ref: 67770
• description: Albirhodobacter marinus partial 16S rRNA gene, type strain N9T
• accession: FR827899
• length: 1405
• database: nuccore
• NCBI tax ID: 992290

GC content

• @ref: 67770
• GC-content: 62.6-63.8
• method: thermal denaturation, midpoint method (Tm)

External links

@ref: 67770

culture collection no.: JCM 17680, MTCC 11277

literature

• topic: Phylogeny
• Pubmed-ID: 23001431
• title: Albirhodobacter marinus gen. nov., sp. nov., a member of the family Rhodobacteraceae isolated from sea shore water of Visakhapatnam, India.
• authors: Nupur, Vaidya B, Tanuku NR, Pinnaka AK
• journal: Antonie Van Leeuwenhoek
• DOI: 10.1007/s10482-012-9814-z
• year: 2012
• mesh: Bacterial Typing Techniques, Base Composition, Catalase/analysis, Cluster Analysis, DNA, Bacterial/chemistry/genetics, DNA, Ribosomal/chemistry/genetics, Fatty Acids/analysis, India, Molecular Sequence Data, Oxidoreductases/analysis, Phylogeny, Quinones/analysis, RNA, Ribosomal, 16S/genetics, Rhodobacteraceae/*classification/genetics/*isolation & purification/physiology, Seawater/*microbiology, Sequence Analysis, DNA
• topic2: Genetics

Reference