Strain identifier
BacDive ID: 162004
Type strain: 
Species: Streptococcus orisasini
Strain history: H. Morita and H. Shiono SH06.
NCBI tax ID(s): 1080071 (species)
version 9.1 (current version)
General
@ref: 67770
BacDive-ID: 162004
keywords: genome sequence, Bacteria, Gram-positive
description: Streptococcus orisasini JCM 17305 is a Gram-positive bacterium that was isolated from Healthy thoroughbred .
NCBI tax id
- NCBI tax id: 1080071
- Matching level: species
strain history
- @ref: 67770
- history: H. Morita and H. Shiono SH06.
doi: 10.13145/bacdive162004.20240916.9.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/bacillota
- domain: Bacteria
- phylum: Bacillota
- class: Bacilli
- order: Lactobacillales
- family: Streptococcaceae
- genus: Streptococcus
- species: Streptococcus orisasini
- full scientific name: Streptococcus orisasini Takada et al. 2013
@ref: 67770
domain: Bacteria
phylum: Firmicutes
class: Bacilli
order: Lactobacillales
family: Streptococcaceae
genus: Streptococcus
species: Streptococcus orisasini
full scientific name: Streptococcus orisasini Takada et al. 2013
type strain: no
Morphology
cell morphology
- @ref: 69480
- motility: no
- confidence: 93.5
Culture and growth conditions
culture temp
- @ref: 67770
- growth: positive
- type: growth
- temperature: 37
Isolation, sampling and environmental information
isolation
- @ref: 67770
- sample type: Healthy thoroughbred (male, 4-year-old)
- country: Japan
- origin.country: JPN
- continent: Asia
Sequence information
Genome sequences
| @ref | description | accession | assembly level | database | NCBI tax ID |
|---|---|---|---|---|---|
| 66792 | Streptococcus orisasini strain SH06 = JCM 17305 | 1080071.3 | wgs | patric | 1080071 |
| 67770 | Streptococcus orisasini SH06 | GCA_001431045 | contig | ncbi | 1080071 |
Genome-based predictions
predictions
| @ref | trait | model | description | prediction | confidence | training_data |
|---|---|---|---|---|---|---|
| 69480 | gram-positive | gram-positive | Positive reaction to Gram-staining | yes | 87.831 | no |
| 69480 | anaerobic | anaerobic | Ability to grow under anoxygenic conditions (including facultative anaerobes) | no | 86.717 | no |
| 69480 | spore-forming | spore-forming | Ability to form endo- or exospores | no | 88.449 | no |
| 69480 | aerobic | aerobic | Ability to grow under oxygenic conditions (including facultative aerobes) | no | 92.74 | no |
| 69480 | thermophilic | thermophile | Ability to grow at temperatures above or equal to 45°C | no | 93 | no |
| 69480 | flagellated | motile2+ | Ability to perform flagellated movement | no | 93.5 | no |
External links
@ref: 67770
culture collection no.: JCM 17305
Reference
| @id | authors | title | doi/url |
|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 |
| 66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | https://diaspora-project.de/progress.html#genomes |
| 67770 | Curators of the JCM | https://jcm.brc.riken.jp/en/ | |
| 69480 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | https://diaspora-project.de/progress.html#genomes |