Strain identifier

BacDive ID: 162002

Type strain: No

Species: Nitratireductor aquimarinus

Strain history: B. C. Cho CL-SC22.

NCBI tax ID(s): 889300 (species)

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General

@ref: 67770

BacDive-ID: 162002

keywords: 16S sequence, Bacteria

description: Nitratireductor aquimarinus JCM 17289 is a bacterium that was isolated from Culture of the diatom Skeletonema costatum.

NCBI tax id

  • NCBI tax id: 889300
  • Matching level: species

strain history

  • @ref: 67770
  • history: B. C. Cho CL-SC22.

doi: 10.13145/bacdive162002.20240510.9

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/pseudomonadota
  • domain: Bacteria
  • phylum: Pseudomonadota
  • class: Alphaproteobacteria
  • order: Hyphomicrobiales
  • family: Phyllobacteriaceae
  • genus: Nitratireductor
  • species: Nitratireductor aquimarinus
  • full scientific name: Nitratireductor aquimarinus Jang et al. 2011

@ref: 67770

domain: Bacteria

phylum: Proteobacteria

class: Alphaproteobacteria

order: Hyphomicrobiales

family: Phyllobacteriaceae

genus: Nitratireductor

species: Nitratireductor aquimarinus

full scientific name: Nitratireductor aquimarinus Jang et al. 2011

type strain: no

Culture and growth conditions

culture temp

  • @ref: 67770
  • growth: positive
  • type: growth
  • temperature: 37

Physiology and metabolism

observation

  • @ref: 67770
  • observation: quinones: Q-10

Isolation, sampling and environmental information

isolation

  • @ref: 67770
  • sample type: Culture of the diatom Skeletonema costatum
  • host species: Skeletonema costatum

taxonmaps

  • @ref: 69479
  • File name: preview.99_15057.png
  • url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_5;96_2450;97_4122;98_11388;99_15057&stattab=map
  • Last taxonomy: Nitratireductor aquimarinus subclade
  • 16S sequence: HQ176466
  • Sequence Identity:
  • Total samples: 534
  • soil counts: 42
  • aquatic counts: 210
  • animal counts: 143
  • plant counts: 139

Sequence information

16S sequences

  • @ref: 67770
  • description: Nitratireductor aquimarinus strain CL-SC22 16S ribosomal RNA gene, partial sequence
  • accession: HQ176466
  • length: 1416
  • database: nuccore
  • NCBI tax ID: 889300

GC content

  • @ref: 67770
  • GC-content: 57.1
  • method: high performance liquid chromatography (HPLC)

External links

@ref: 67770

culture collection no.: JCM 17289

Reference

@idauthorstitledoi/url
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
67770Curators of the JCMhttps://jcm.brc.riken.jp/en/
69479João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.MicrobeAtlas 1.0 betahttps://microbeatlas.org/