Strain identifier
BacDive ID: 161816
Type strain:
Species: Pontibacter sp.
Strain history: R. K. Jain MW4.
NCBI tax ID(s): 1895908 (species)
version 8.1 (current version)
General
@ref: 67770
BacDive-ID: 161816
keywords: 16S sequence, Bacteria, mesophilic
description: Pontibacter sp. JCM 16564 is a mesophilic bacterium that was isolated from Marine water from Bay of Bengal.
NCBI tax id
- NCBI tax id: 1895908
- Matching level: species
strain history
- @ref: 67770
- history: R. K. Jain MW4.
doi: 10.13145/bacdive161816.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/bacteroidota
- domain: Bacteria
- phylum: Bacteroidota
- class: Cytophagia
- order: Cytophagales
- family: Hymenobacteraceae
- genus: Pontibacter
- species: Pontibacter sp.
- full scientific name: Pontibacter Nedashkovskaya et al. 2005
synonyms
- @ref: 20215
- synonym: Effluviibacter
@ref: 67770
domain: Bacteria
phylum: Bacteroidetes
class: Cytophagia
order: Cytophagales
family: Hymenobacteraceae
genus: Pontibacter
species: Pontibacter sp.
full scientific name: Pontibacter sp.
type strain: no
Culture and growth conditions
culture temp
- @ref: 67770
- growth: positive
- type: growth
- temperature: 30
- range: mesophilic
Isolation, sampling and environmental information
isolation
- @ref: 67770
- sample type: Marine water from Bay of Bengal
- country: India
- origin.country: IND
- continent: Asia
taxonmaps
- @ref: 69479
- File name: preview.99_28158.png
- url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_60;96_1325;97_16945;98_21051;99_28158&stattab=map
- Last taxonomy: Pontibacter
- 16S sequence: GQ927311
- Sequence Identity:
- Total samples: 704
- soil counts: 479
- aquatic counts: 94
- animal counts: 114
- plant counts: 17
Sequence information
16S sequences
- @ref: 67770
- description: Pontibacter sp. MW 4 16S ribosomal RNA gene, partial sequence
- accession: GQ927311
- length: 1406
- database: ena
- NCBI tax ID: 683154
External links
@ref: 67770
culture collection no.: JCM 16564, MTCC 10101
Reference
@id | authors | title | doi/url |
---|---|---|---|
20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 |
67770 | Curators of the JCM | https://jcm.brc.riken.jp/en/ | |
69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich. | MicrobeAtlas 1.0 beta | https://microbeatlas.org/ |