General

@ref: 67770

BacDive-ID: 161772

keywords: 16S sequence, Bacteria

description: Constrictibacter antarcticus JCM 16422 is a bacterium that was isolated from Cavity within white rock collected in the Skallen region of Antarctica.

NCBI tax id

• NCBI tax id: 656747
• Matching level: species

strain history

• @ref: 67770
• history: T. Imanaka 262-8.

doi: 10.13145/bacdive161772.20240510.9

Name and taxonomic classification

LPSN

• @ref: 20215
• description: domain/bacteria
• keyword: phylum/pseudomonadota
• domain: Bacteria
• phylum: Pseudomonadota
• class: Alphaproteobacteria
• order: Rhodospirillales
• family: Stellaceae
• genus: Constrictibacter
• species: Constrictibacter antarcticus
• full scientific name: Constrictibacter antarcticus Yamada et al. 2011

@ref: 67770

domain: Bacteria

phylum: Proteobacteria

class: Alphaproteobacteria

order: Rhodospirillales

family: Stellaceae

genus: Constrictibacter

species: Constrictibacter antarcticus

full scientific name: Constrictibacter antarcticus Yamada et al. 2011

type strain: yes

Culture and growth conditions

culture temp

• @ref: 67770
• growth: positive
• type: growth
• temperature: 25

Physiology and metabolism

observation

• @ref: 67770
• observation: quinones: Q-10, Q-8

Isolation, sampling and environmental information

isolation

• @ref: 67770
• sample type: Cavity within white rock collected in the Skallen region of Antarctica

taxonmaps

• @ref: 69479
• File name: preview.99_40321.png
• url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_16230;96_14039;97_21082;98_29430;99_40321&stattab=map
• Last taxonomy: Constrictibacter antarcticus subclade
• 16S sequence: AB510913
• Sequence Identity:
• Total samples: 5112
• soil counts: 2234
• aquatic counts: 2249
• animal counts: 390
• plant counts: 239

Sequence information

16S sequences

• @ref: 67770
• description: Constrictibacter antarcticus gene for 16S rRNA, partial sequence
• accession: AB510913
• length: 1456
• database: nuccore
• NCBI tax ID: 656747

GC content

• @ref: 67770
• GC-content: 69.8
• method: high performance liquid chromatography (HPLC)

External links

@ref: 67770

culture collection no.: JCM 16422, ATCC BAA-1906

literature

• topic: Phylogeny
• Pubmed-ID: 20851919
• title: Constrictibacter antarcticus gen. nov., sp. nov., a cryptoendolithic micro-organism from Antarctic white rock.
• authors: Yamada K, Fukuda W, Kondo Y, Miyoshi Y, Atomi H, Imanaka T
• journal: Int J Syst Evol Microbiol
• DOI: 10.1099/ijs.0.026625-0
• year: 2010
• mesh: Antarctic Regions, Base Composition, DNA, Bacterial/genetics, DNA, Ribosomal/genetics, Fatty Acids/metabolism, Geologic Sediments/*microbiology, Molecular Sequence Data, Phylogeny, RNA, Ribosomal, 16S/genetics, Rhodospirillaceae/*classification/genetics/*isolation & purification/metabolism
• topic2: Metabolism

Reference