Strain identifier

BacDive ID: 161771

Type strain: No

Species: Salimicrobium salexigens

Strain history: C. Sánchez-Porro 53CMI.

NCBI tax ID(s): 908941 (species)

For citation purpose refer to the digital object identifier (doi) of the current version.
Archive
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General

@ref: 67770

BacDive-ID: 161771

keywords: 16S sequence, Bacteria

description: Salimicrobium salexigens JCM 16415 is a bacterium that was isolated from Salted hides from Australia.

NCBI tax id

  • NCBI tax id: 908941
  • Matching level: species

strain history

  • @ref: 67770
  • history: C. Sánchez-Porro 53CMI.

doi: 10.13145/bacdive161771.20240510.9

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/bacillota
  • domain: Bacteria
  • phylum: Bacillota
  • class: Bacilli
  • order: Caryophanales
  • family: Bacillaceae
  • genus: Salimicrobium
  • species: Salimicrobium salexigens
  • full scientific name: Salimicrobium salexigens de la Haba et al. 2011

@ref: 67770

domain: Bacteria

phylum: Firmicutes

class: Bacilli

order: Caryophanales

family: Bacillaceae

genus: Salimicrobium

species: Salimicrobium salexigens

full scientific name: Salimicrobium salexigens de la Haba et al. 2011

type strain: no

Culture and growth conditions

culture temp

  • @ref: 67770
  • growth: positive
  • type: growth
  • temperature: 37

Isolation, sampling and environmental information

isolation

  • @ref: 67770
  • sample type: Salted hides from Australia

taxonmaps

  • @ref: 69479
  • File name: preview.99_2402.png
  • url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_3;96_1295;97_1539;98_1873;99_2402&stattab=map
  • Last taxonomy: Salimicrobium
  • 16S sequence: FR714936
  • Sequence Identity:
  • Total samples: 1019
  • soil counts: 46
  • aquatic counts: 301
  • animal counts: 650
  • plant counts: 22

Sequence information

16S sequences

  • @ref: 67770
  • description: Salimicrobium salexigens 16S rRNA gene, strain 53CMI
  • accession: FR714936
  • length: 1438
  • database: nuccore
  • NCBI tax ID: 908941

GC content

  • @ref: 67770
  • GC-content: 51.5
  • method: thermal denaturation, midpoint method (Tm)

External links

@ref: 67770

culture collection no.: JCM 16415

Reference

@idauthorstitledoi/url
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
67770Curators of the JCMhttps://jcm.brc.riken.jp/en/
69479João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.MicrobeAtlas 1.0 betahttps://microbeatlas.org/