Strain identifier
BacDive ID: 161714
Type strain: 
Species: Algoriphagus sp.
Strain history: T. Naganuma clone #11.
NCBI tax ID(s): 1872435 (species)
version 9 (current version)
General
@ref: 67770
BacDive-ID: 161714
keywords: 16S sequence, Bacteria
description: Algoriphagus sp. JCM 16080 is a bacterium that was isolated from Kaiike.
NCBI tax id
- NCBI tax id: 1872435
- Matching level: species
strain history
- @ref: 67770
- history: T. Naganuma clone #11.
doi: 10.13145/bacdive161714.20240510.9
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/bacteroidota
- domain: Bacteria
- phylum: Bacteroidota
- class: Cytophagia
- order: Cytophagales
- family: Cyclobacteriaceae
- genus: Algoriphagus
- species: Algoriphagus sp.
- full scientific name: Algoriphagus Bowman et al. 2003
synonyms
@ref synonym 20215 Hongiella 20215 Chimaereicella
@ref: 67770
domain: Bacteria
phylum: Bacteroidetes
class: Cytophagia
order: Cytophagales
family: Cyclobacteriaceae
genus: Algoriphagus
species: Algoriphagus sp.
full scientific name: Algoriphagus sp.
type strain: no
Culture and growth conditions
culture temp
- @ref: 67770
- growth: positive
- type: growth
- temperature: 25
Isolation, sampling and environmental information
isolation
- @ref: 67770
- sample type: Kaiike
- geographic location: Koshikijima, Kagoshima
- country: Japan
- origin.country: JPN
- continent: Asia
taxonmaps
- @ref: 69479
- File name: preview.99_28357.png
- url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_15774;96_14005;97_17066;98_21199;99_28357&stattab=map
- Last taxonomy: Algoriphagus
- 16S sequence: AB461941
- Sequence Identity:
- Total samples: 180
- soil counts: 26
- aquatic counts: 104
- animal counts: 38
- plant counts: 12
Sequence information
16S sequences
- @ref: 67770
- description: Uncultured bacterium gene for 16S rRNA, partial sequence, clone: #11
- accession: AB461941
- length: 1465
- database: nuccore
- NCBI tax ID: 77133
External links
@ref: 67770
culture collection no.: JCM 16080
Reference
| @id | authors | title | doi/url |
|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 |
| 67770 | Curators of the JCM | https://jcm.brc.riken.jp/en/ | |
| 69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich. | MicrobeAtlas 1.0 beta | https://microbeatlas.org/ |