Strain identifier
BacDive ID: 161529
Type strain: 
Species: Microbacterium sp.
Strain history: K. Minamisawa B24.
NCBI tax ID(s): 51671 (species)
version 8.1 (current version)
General
@ref: 67770
BacDive-ID: 161529
keywords: genome sequence, 16S sequence, Bacteria, mesophilic
description: Microbacterium sp. JCM 14691 is a mesophilic bacterium that was isolated from Stem of wild rice, Oryza officinalis W0012.
NCBI tax id
- NCBI tax id: 51671
- Matching level: species
strain history
- @ref: 67770
- history: K. Minamisawa B24.
doi: 10.13145/bacdive161529.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/actinomycetota
- domain: Bacteria
- phylum: Actinomycetota
- class: Actinomycetes
- order: Micrococcales
- family: Microbacteriaceae
- genus: Microbacterium
- species: Microbacterium sp.
- full scientific name: Microbacterium Orla-Jensen 1919 (Approved Lists 1980)
synonyms
- @ref: 20215
- synonym: Aureobacterium
@ref: 67770
domain: Bacteria
phylum: Actinobacteria
class: Actinobacteria
order: Micrococcales
family: Microbacteriaceae
genus: Microbacterium
species: Microbacterium sp.
full scientific name: Microbacterium sp.
type strain: no
Culture and growth conditions
culture temp
- @ref: 67770
- growth: positive
- type: growth
- temperature: 28
- range: mesophilic
Isolation, sampling and environmental information
isolation
- @ref: 67770
- sample type: Stem of wild rice, Oryza officinalis W0012
- host species: Oryza officinalis
Sequence information
16S sequences
- @ref: 67770
- description: Microbacterium sp. B24 gene for 16S ribosomal RNA
- accession: AB027701
- length: 563
- database: ena
- NCBI tax ID: 95616
Genome sequences
- @ref: 67770
- description: Microbacterium sp. B24
- accession: GCA_000333415
- assembly level: contig
- database: ncbi
- NCBI tax ID: 95616
Genome-based predictions
predictions
| trait | prediction | confidence | training_data |
|---|---|---|---|
| motile | no | 89.756 | no |
| flagellated | no | 97.999 | no |
| gram-positive | yes | 95.244 | no |
| anaerobic | no | 99.188 | no |
| aerobic | yes | 89.753 | no |
| halophile | no | 88.441 | no |
| spore-forming | no | 95.253 | no |
| thermophile | no | 99.626 | no |
| glucose-util | yes | 86.46 | no |
| glucose-ferment | no | 87.418 | no |
External links
@ref: 67770
culture collection no.: JCM 14691
Reference
| @id | authors | title | doi/url |
|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 |
| 67770 | Curators of the JCM | https://jcm.brc.riken.jp/en/ |