Strain identifier
BacDive ID: 161414
Type strain: 
Species: Sphingobium sp.
Strain history: F. Kawai P3.
NCBI tax ID(s): 1912891 (species)
version 8.1 (current version)
General
@ref: 67770
BacDive-ID: 161414
keywords: 16S sequence, Bacteria, mesophilic
description: Sphingobium sp. JCM 13902 is a mesophilic bacterium that was isolated from Activated sludge from an industrial plant.
NCBI tax id
- NCBI tax id: 1912891
- Matching level: species
strain history
- @ref: 67770
- history: F. Kawai P3.
doi: 10.13145/bacdive161414.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/pseudomonadota
- domain: Bacteria
- phylum: Pseudomonadota
- class: Alphaproteobacteria
- order: Sphingomonadales
- family: Sphingomonadaceae
- genus: Sphingobium
- species: Sphingobium sp.
- full scientific name: Sphingobium Takeuchi et al. 2001
@ref: 67770
domain: Bacteria
phylum: Proteobacteria
class: Alphaproteobacteria
order: Sphingomonadales
family: Sphingomonadaceae
genus: Sphingobium
species: Sphingobium sp.
full scientific name: Sphingobium sp.
type strain: no
Culture and growth conditions
culture temp
- @ref: 67770
- growth: positive
- type: growth
- temperature: 28
- range: mesophilic
Isolation, sampling and environmental information
isolation
- @ref: 67770
- sample type: Activated sludge from an industrial plant
- country: Japan
- origin.country: JPN
- continent: Asia
taxonmaps
- @ref: 69479
- File name: preview.99_2359.png
- url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_20;96_774;97_1511;98_1839;99_2359&stattab=map
- Last taxonomy: Sphingomonadaceae
- 16S sequence: AB255385
- Sequence Identity:
- Total samples: 21961
- soil counts: 3574
- aquatic counts: 11123
- animal counts: 3656
- plant counts: 3608
Sequence information
16S sequences
- @ref: 67770
- description: Sphingomonas sp. P3 gene for 16S rRNA, partial sequence
- accession: AB255385
- length: 1450
- database: ena
- NCBI tax ID: 379352
External links
@ref: 67770
culture collection no.: JCM 13902
Reference
| @id | authors | title | doi/url |
|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 |
| 67770 | Curators of the JCM | https://jcm.brc.riken.jp/en/ | |
| 69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich. | MicrobeAtlas 1.0 beta | https://microbeatlas.org/ |