Strain identifier
BacDive ID: 161267
Type strain: 
Species: Magnetospirillum sp.
Strain history: N. Kato PM2411.
NCBI tax ID(s): 31872 (species)
version 9 (current version)
General
@ref: 67770
BacDive-ID: 161267
keywords: 16S sequence, Bacteria
description: Magnetospirillum sp. JCM 12779 is a bacterium that was isolated from Rice paddy soil by enrichment culture with phenol.
NCBI tax id
- NCBI tax id: 31872
- Matching level: species
strain history
- @ref: 67770
- history: N. Kato PM2411.
doi: 10.13145/bacdive161267.20240510.9
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/pseudomonadota
- domain: Bacteria
- phylum: Pseudomonadota
- class: Alphaproteobacteria
- order: Rhodospirillales
- family: Rhodospirillaceae
- genus: Magnetospirillum
- species: Magnetospirillum sp.
- full scientific name: Magnetospirillum Schleifer et al. 1992
synonyms
@ref synonym 20215 Phaeospirillum 20215 Paramagnetospirillum
@ref: 67770
domain: Bacteria
phylum: Proteobacteria
class: Alphaproteobacteria
order: Rhodospirillales
family: Rhodospirillaceae
genus: Magnetospirillum
species: Magnetospirillum sp.
full scientific name: Magnetospirillum sp.
type strain: no
Culture and growth conditions
culture temp
- @ref: 67770
- growth: positive
- type: growth
- temperature: 30
Physiology and metabolism
observation
- @ref: 67770
- observation: quinones: Q-10
Isolation, sampling and environmental information
isolation
- @ref: 67770
- sample type: Rice paddy soil by enrichment culture with phenol
taxonmaps
- @ref: 69479
- File name: preview.99_1353.png
- url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_215;96_782;97_911;98_1068;99_1353&stattab=map
- Last taxonomy: Magnetospirillum
- 16S sequence: AB167724
- Sequence Identity:
- Total samples: 10527
- soil counts: 1907
- aquatic counts: 6745
- animal counts: 813
- plant counts: 1062
Sequence information
16S sequences
- @ref: 67770
- description: Magnetospirillum sp. PM2411 gene for 16S ribosomal RNA
- accession: AB167724
- length: 1455
- database: nuccore
- NCBI tax ID: 267354
External links
@ref: 67770
culture collection no.: JCM 12779
straininfo link
- @ref: 113327
- straininfo: 301396
Reference
| @id | authors | title | doi/url |
|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 |
| 67770 | Curators of the JCM | https://jcm.brc.riken.jp/en/ | |
| 69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich. | MicrobeAtlas 1.0 beta | https://microbeatlas.org/ |
| 113327 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | StrainInfo: A central database for resolving microbial strain identifiers | 10.60712/SI-ID301396.1 |