Strain identifier

BacDive ID: 161215

Type strain: No

Species: Janibacter melonis

Strain history: J.-H. Yoon CM2110.

NCBI tax ID(s): 262209 (species)

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General

@ref: 67770

BacDive-ID: 161215

keywords: 16S sequence, Bacteria, mesophilic

description: Janibacter melonis JCM 12322 is a mesophilic bacterium that was isolated from Abnormally spoiled oriental melon .

NCBI tax id

  • NCBI tax id: 262209
  • Matching level: species

strain history

  • @ref: 67770
  • history: J.-H. Yoon CM2110.

doi: 10.13145/bacdive161215.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/actinomycetota
  • domain: Bacteria
  • phylum: Actinomycetota
  • class: Actinomycetes
  • order: Micrococcales
  • family: Intrasporangiaceae
  • genus: Janibacter
  • species: Janibacter melonis
  • full scientific name: Janibacter melonis Yoon et al. 2004

@ref: 67770

domain: Bacteria

phylum: Actinobacteria

class: Actinobacteria

order: Micrococcales

family: Intrasporangiaceae

genus: Janibacter

species: Janibacter melonis

full scientific name: Janibacter melonis Yoon et al. 2004

type strain: no

Culture and growth conditions

culture temp

  • @ref: 67770
  • growth: positive
  • type: growth
  • temperature: 28
  • range: mesophilic

Physiology and metabolism

observation

  • @ref: 67770
  • observation: quinones: MK-8(H4)

Isolation, sampling and environmental information

isolation

  • @ref: 67770
  • sample type: Abnormally spoiled oriental melon (Cucumis melo)
  • host species: Cucumis melo
  • country: Republic of Korea
  • origin.country: KOR
  • continent: Asia

taxonmaps

  • @ref: 69479
  • File name: preview.99_8290.png
  • url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_9;96_927;97_1079;98_6034;99_8290&stattab=map
  • Last taxonomy: Janibacter melonis subclade
  • 16S sequence: AY522569
  • Sequence Identity:
  • Total samples: 1228
  • soil counts: 27
  • aquatic counts: 41
  • animal counts: 1135
  • plant counts: 25

Sequence information

16S sequences

  • @ref: 67770
  • description: Janibacter melonis strain CM2110 16S ribosomal RNA gene, partial sequence
  • accession: AY522569
  • length: 1479
  • database: ena
  • NCBI tax ID: 262209

GC content

  • @ref: 67770
  • GC-content: 73
  • method: high performance liquid chromatography (HPLC)

External links

@ref: 67770

culture collection no.: JCM 12322, KCTC 9988

straininfo link

  • @ref: 113283
  • straininfo: 231877

Reference

@idauthorstitledoi/url
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
67770Curators of the JCMhttps://jcm.brc.riken.jp/en/
69479João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.MicrobeAtlas 1.0 betahttps://microbeatlas.org/
113283Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID231877.1