Strain identifier
BacDive ID: 161022
Type strain: 
Species: Weissella sp.
Strain history: S. Tanasupawat FS45-1.
NCBI tax ID(s): 1896315 (species)
version 8.1 (current version)
General
@ref: 67770
BacDive-ID: 161022
keywords: 16S sequence, Bacteria, mesophilic
description: Weissella sp. JCM 10694 is a mesophilic bacterium that was isolated from Fermented fish .
NCBI tax id
- NCBI tax id: 1896315
- Matching level: species
strain history
- @ref: 67770
- history: S. Tanasupawat FS45-1.
doi: 10.13145/bacdive161022.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/bacillota
- domain: Bacteria
- phylum: Bacillota
- class: Bacilli
- order: Lactobacillales
- family: Lactobacillaceae
- genus: Weissella
- species: Weissella sp.
- full scientific name: Weissella Collins et al. 1994
@ref: 67770
domain: Bacteria
phylum: Firmicutes
class: Bacilli
order: Lactobacillales
family: Leuconostocaceae
genus: Weissella
species: Weissella sp.
full scientific name: Weissella sp.
type strain: no
Culture and growth conditions
culture temp
- @ref: 67770
- growth: positive
- type: growth
- temperature: 30
- range: mesophilic
Isolation, sampling and environmental information
isolation
- @ref: 67770
- sample type: Fermented fish (pla-ra)
- country: Thailand
- origin.country: THA
- continent: Asia
taxonmaps
- @ref: 69479
- File name: preview.99_867.png
- url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_155;96_519;97_597;98_686;99_867&stattab=map
- Last taxonomy: Weissella
- 16S sequence: LC306848
- Sequence Identity:
- Total samples: 14915
- soil counts: 1853
- aquatic counts: 1125
- animal counts: 11172
- plant counts: 765
Sequence information
16S sequences
| @ref | description | accession | length | database | NCBI tax ID |
|---|---|---|---|---|---|
| 67770 | Weissella thailandensis gene for 16S rRNA, partial sequence, strain:FS45-1 | AB023839 | 1417 | ena | 89061 |
| 67770 | Weissella sp. gene for 16S ribosomal RNA, partial sequence, strain: JCM 10694 | LC306848 | 1511 | ena | 1896315 |
GC content
- @ref: 67770
- GC-content: 38
- method: high performance liquid chromatography (HPLC)
External links
@ref: 67770
culture collection no.: JCM 10694, HSCC 1410, NRIC 0296, PCU 209, TISTR 1385
Reference
| @id | authors | title | doi/url |
|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 |
| 67770 | Curators of the JCM | https://jcm.brc.riken.jp/en/ | |
| 69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich. | MicrobeAtlas 1.0 beta | https://microbeatlas.org/ |