Strain identifier
BacDive ID: 161014
Type strain: 
Species: Solobacterium moorei
Strain history: Y. Benno RCA59-79.
NCBI tax ID(s): 102148 (species)
version 8.1 (current version)
General
@ref: 67770
BacDive-ID: 161014
keywords: 16S sequence, Bacteria, mesophilic
description: Solobacterium moorei JCM 10647 is a mesophilic bacterium that was isolated from Human feces.
NCBI tax id
- NCBI tax id: 102148
- Matching level: species
strain history
- @ref: 67770
- history: Y. Benno RCA59-79.
doi: 10.13145/bacdive161014.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/bacillota
- domain: Bacteria
- phylum: Bacillota
- class: Erysipelotrichia
- order: Erysipelotrichales
- family: Erysipelotrichaceae
- genus: Solobacterium
- species: Solobacterium moorei
- full scientific name: Solobacterium moorei Kageyama and Benno 2000
@ref: 67770
domain: Bacteria
phylum: Firmicutes
class: Erysipelotrichia
order: Erysipelotrichales
family: Erysipelotrichaceae
genus: Solobacterium
species: Solobacterium moorei
full scientific name: Solobacterium moorei Kageyama and Benno 2000
type strain: no
Culture and growth conditions
culture temp
- @ref: 67770
- growth: positive
- type: growth
- temperature: 37
- range: mesophilic
Isolation, sampling and environmental information
isolation
- @ref: 67770
- sample type: Human feces
- country: Japan
- origin.country: JPN
- continent: Asia
taxonmaps
- @ref: 69479
- File name: preview.99_6212.png
- url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_559;96_2960;97_3641;98_4607;99_6212&stattab=map
- Last taxonomy: Solobacterium moorei subclade
- 16S sequence: LC480795
- Sequence Identity:
- Total samples: 145588
- soil counts: 1378
- aquatic counts: 2345
- animal counts: 141203
- plant counts: 662
Sequence information
16S sequences
| @ref | description | accession | length | database | NCBI tax ID |
|---|---|---|---|---|---|
| 67770 | Solobacterium moorei gene for 16S rRNA, isolate:RCA59-77 | AB031058 | 1488 | ena | 102148 |
| 67770 | Solobacterium moorei JCM 10647 gene for 16S ribosomal RNA, partial sequence | LC480795 | 1463 | ena | 102148 |
GC content
- @ref: 67770
- GC-content: 38.1
- method: thermal denaturation, midpoint method (Tm)
External links
@ref: 67770
culture collection no.: JCM 10647
straininfo link
- @ref: 113147
- straininfo: 88238
Reference
| @id | authors | title | doi/url |
|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 |
| 67770 | Curators of the JCM | https://jcm.brc.riken.jp/en/ | |
| 69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich. | MicrobeAtlas 1.0 beta | https://microbeatlas.org/ |
| 113147 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | StrainInfo: A central database for resolving microbial strain identifiers | 10.60712/SI-ID88238.1 |