Strain identifier
BacDive ID: 160728
Type strain: 
Species: Lactobacillus bombicola
Strain Designation: H53-31
Strain history: <- J. Praet, Ghent Univ., Belgium; H53-31
NCBI tax ID(s): 1505723 (species)
version 8.1 (current version)
General
@ref: 67641
BacDive-ID: 160728
DSM-Number: 28828
keywords: Bacteria, mesophilic
description: Lactobacillus bombicola H53-31 is a mesophilic bacterium that was isolated from bumblebee gut.
NCBI tax id
- NCBI tax id: 1505723
- Matching level: species
strain history
- @ref: 67641
- history: <- J. Praet, Ghent Univ., Belgium; H53-31
doi: 10.13145/bacdive160728.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/bacillota
- domain: Bacteria
- phylum: Bacillota
- class: Bacilli
- order: Lactobacillales
- family: Lactobacillaceae
- genus: Lactobacillus
- species: Lactobacillus bombicola
- full scientific name: Lactobacillus bombicola Praet et al. 2015
@ref: 67641
domain: Bacteria
phylum: Firmicutes
class: Bacilli
order: Lactobacillales
family: Lactobacillaceae
genus: Lactobacillus
species: Lactobacillus bombicola
full scientific name: Lactobacillus bombicola Praet et al. 2015
strain designation: H53-31
type strain: no
Culture and growth conditions
culture medium
- @ref: 67641
- name: MRS pre-reduced (DSMZ Medium 11b)
- growth: yes
- link: https://mediadive.dsmz.de/medium/11b
- composition: Name: MRS MEDIUM (pre-reduced) (DSMZ Medium 11b) Composition: Glucose 20.0 g/l Casein peptone 10.0 g/l Meat extract 10.0 g/l Na-acetate 5.0 g/l Yeast extract 5.0 g/l (NH4)3 citrate 2.0 g/l K2HPO4 2.0 g/l Tween 80 1.0 g/l L-Cysteine HCl x H2O 0.5 g/l MgSO4 x 7 H2O 0.2 g/l MnSO4 x H2O 0.05 g/l Resazurin 0.001 g/l Distilled water
culture temp
- @ref: 67641
- growth: positive
- type: growth
- temperature: 30
- range: mesophilic
Physiology and metabolism
metabolite utilization
| @ref | Chebi-ID | metabolite | utilization activity | kind of utilization tested |
|---|---|---|---|---|
| 68371 | 17754 | glycerol | - | builds acid from |
| 68371 | 17113 | erythritol | - | builds acid from |
| 68371 | 17108 | D-arabinose | - | builds acid from |
| 68371 | 65327 | D-xylose | - | builds acid from |
| 68371 | 65328 | L-xylose | - | builds acid from |
| 68371 | 15963 | ribitol | - | builds acid from |
| 68371 | 74863 | methyl beta-D-xylopyranoside | - | builds acid from |
| 68371 | 17634 | D-glucose | + | builds acid from |
| 68371 | 15824 | D-fructose | + | builds acid from |
| 68371 | 16024 | D-mannose | + | builds acid from |
| 68371 | 17266 | L-sorbose | - | builds acid from |
| 68371 | 62345 | L-rhamnose | - | builds acid from |
| 68371 | 16813 | galactitol | - | builds acid from |
| 68371 | 17268 | myo-inositol | - | builds acid from |
| 68371 | 16899 | D-mannitol | - | builds acid from |
| 68371 | 17924 | D-sorbitol | - | builds acid from |
| 68371 | 43943 | methyl alpha-D-mannoside | - | builds acid from |
| 68371 | 320061 | methyl alpha-D-glucopyranoside | - | builds acid from |
| 68371 | 27613 | amygdalin | - | builds acid from |
| 68371 | 28053 | melibiose | - | builds acid from |
| 68371 | 15443 | inulin | - | builds acid from |
| 68371 | 6731 | melezitose | - | builds acid from |
| 68371 | 16634 | raffinose | - | builds acid from |
| 68371 | 28017 | starch | - | builds acid from |
| 68371 | 28087 | glycogen | - | builds acid from |
| 68371 | 17151 | xylitol | - | builds acid from |
| 68371 | 62318 | D-lyxose | - | builds acid from |
| 68371 | 16443 | D-tagatose | - | builds acid from |
| 68371 | 28847 | D-fucose | - | builds acid from |
| 68371 | 18287 | L-fucose | - | builds acid from |
| 68371 | 18333 | D-arabitol | - | builds acid from |
| 68371 | 18403 | L-arabitol | - | builds acid from |
| 68371 | 24265 | gluconate | - | builds acid from |
| 68371 | Potassium 2-ketogluconate | - | builds acid from | |
| 68371 | Potassium 5-ketogluconate | - | builds acid from |
API 50CHac
| @ref | Q | GLY | ERY | DARA | LARA | RIB | DXYL | LXYL | ADO | MDX | GAL | GLU | FRU | MNE | SBE | RHA | DUL | INO | MAN | SOR | MDM | MDG | NAG | AMY | ARB | ESC | SAL | CEL | MAL | LAC | MEL | SAC | TRE | INU | MLZ | RAF | AMD | GLYG | XLT | GEN | TUR | LYX | TAG | DFUC | LFUC | DARL | LARL | GNT | 2KG | 5KG |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 67641 | - | - | - | - | + | - | - | - | - | - | - | + | + | + | - | - | - | - | - | - | - | - | + | - | + | + | + | + | - | - | - | - | + | - | - | - | - | - | - | + | - | - | - | - | - | - | - | - | - | - |
| 67641 | - | - | - | - | - | + | - | - | - | - | + | + | + | + | - | - | - | - | - | - | - | - | - | - | - | - | - | - | + | + | - | + | - | - | - | - | - | - | - | - | + | - | - | - | - | - | - | - | - | - |
Isolation, sampling and environmental information
isolation
- @ref: 67641
- sample type: bumblebee gut
- geographic location: Ghent
- country: Belgium
- origin.country: BEL
- continent: Europe
Safety information
risk assessment
- @ref: 67641
- biosafety level: 1
- biosafety level comment: Risk group (German classification)
External links
@ref: 67641
culture collection no.: DSM 28828, LMG 28289
straininfo link
- @ref: 112954
- straininfo: 396389
Reference
| @id | authors | title | doi/url | catalogue |
|---|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | |
| 67641 | Curators of the DSMZ | https://www.dsmz.de/collection/catalogue/details/culture/DSM-28828 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 28828) | |
| 68371 | Automatically annotated from API 50CH acid | |||
| 112954 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | StrainInfo: A central database for resolving microbial strain identifiers | 10.60712/SI-ID396389.1 |