Strain identifier
BacDive ID: 160510
Type strain: 
Species: Actinobacillus pleuropneumoniae
Strain Designation: 16287-1
Strain history: <- C. Rohde, University of Veterinary Medicine Hannover, Germany; 16287-1 <- J. Bosse, Imperial College London; <- Ö. Angen, National Veterinary Institute, Technical University of Denmark, Copenhagen;
NCBI tax ID(s): 715 (species)
General
@ref: 67418
BacDive-ID: 160510
DSM-Number: 112700
keywords: genome sequence, Bacteria, animal pathogen
description: Actinobacillus pleuropneumoniae 16287-1 is an animal pathogen that was isolated from pig tonsil.
NCBI tax id
- NCBI tax id: 715
- Matching level: species
strain history
- @ref: 67418
- history: <- C. Rohde, University of Veterinary Medicine Hannover, Germany; 16287-1 <- J. Bosse, Imperial College London; <- Ö. Angen, National Veterinary Institute, Technical University of Denmark, Copenhagen;
doi: 10.13145/bacdive160510.20240916.9.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/pseudomonadota
- domain: Bacteria
- phylum: Pseudomonadota
- class: Gammaproteobacteria
- order: Pasteurellales
- family: Pasteurellaceae
- genus: Actinobacillus
- species: Actinobacillus pleuropneumoniae
- full scientific name: Actinobacillus pleuropneumoniae (Shope 1964) Pohl et al. 1983
synonyms
@ref synonym 20215 Haemophilus pleuropneumoniae 20215 Hemophilus pleuropneumoniae
@ref: 67418
domain: Bacteria
phylum: Proteobacteria
class: Gammaproteobacteria
order: Pasteurellales
family: Pasteurellaceae
genus: Actinobacillus
species: Actinobacillus pleuropneumoniae
full scientific name: Actinobacillus pleuropneumoniae (Shope 1964) Pohl et al. 1983
strain designation: 16287-1
type strain: no
Morphology
cell morphology
| @ref | motility | confidence | gram stain |
|---|---|---|---|
| 69480 | no | 92.321 | |
| 69480 | 97.5 | negative |
Culture and growth conditions
culture medium
- @ref: 67418
- name: HAEMOPHILUS MEDIUM (DSMZ Medium 804)
- growth: yes
- link: https://mediadive.dsmz.de/medium/804
- composition: Name: HAEMOPHILUS MEDIUM (DSMZ Medium 804) Composition: Mueller-Hinton broth 21.0 g/l Yeast extract 5.0 g/l Distilled water
culture temp
- @ref: 67418
- growth: positive
- type: growth
- temperature: 37
Isolation, sampling and environmental information
isolation
- @ref: 67418
- sample type: pig tonsil
- country: Denmark
- origin.country: DNK
- continent: Europe
- latitude: 55.79
- longitude: 12.5158
Safety information
risk assessment
- @ref: 67418
- pathogenicity animal: yes
- biosafety level: 2
- biosafety level comment: Risk group (German classification)
Sequence information
Genome sequences
- @ref: 66792
- description: Actinobacillus pleuropneumoniae 16287-1
- accession: GCA_021953265
- assembly level: complete
- database: ncbi
- NCBI tax ID: 715
Genome-based predictions
predictions
| @ref | trait | model | description | prediction | confidence | training_data |
|---|---|---|---|---|---|---|
| 69480 | gram-positive | gram-positive | Positive reaction to Gram-staining | no | 97.5 | no |
| 69480 | anaerobic | anaerobic | Ability to grow under anoxygenic conditions (including facultative anaerobes) | no | 94.317 | no |
| 69480 | aerobic | aerobic | Ability to grow under oxygenic conditions (including facultative aerobes) | no | 79.601 | no |
| 69480 | spore-forming | spore-forming | Ability to form endo- or exospores | no | 89.866 | no |
| 69480 | thermophilic | thermophile | Ability to grow at temperatures above or equal to 45°C | no | 97.5 | yes |
| 69480 | flagellated | motile2+ | Ability to perform flagellated movement | no | 92.321 | no |
External links
@ref: 67418
culture collection no.: DSM 112700
straininfo link
- @ref: 112753
- straininfo: 402849
Reference
| @id | authors | title | doi/url | catalogue |
|---|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | |
| 66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | https://diaspora-project.de/progress.html#genomes | |
| 67418 | Curators of the DSMZ | https://www.dsmz.de/collection/catalogue/details/culture/DSM-112700 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 112700) | |
| 69480 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | https://diaspora-project.de/progress.html#genomes | |
| 112753 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | StrainInfo: A central database for resolving microbial strain identifiers | 10.60712/SI-ID402849.1 |