Strain identifier
BacDive ID: 160170
Type strain: 
Species: Rhodococcus erythropolis
Strain Designation: CCMMB1294, GK12
Strain history: <- J. Kreit, Faculty of Science, Rabat, Morocco; GK12 <- P. Germain and J. Kreit; GK12
NCBI tax ID(s): 1833 (species)
General
@ref: 67074
BacDive-ID: 160170
DSM-Number: 102980
keywords: 16S sequence, human pathogen
description: Rhodococcus erythropolis CCMMB1294 is a human pathogen that was isolated from soil polluted with fuel and organic wastes.
NCBI tax id
- NCBI tax id: 1833
- Matching level: species
strain history
- @ref: 67074
- history: <- J. Kreit, Faculty of Science, Rabat, Morocco; GK12 <- P. Germain and J. Kreit; GK12
doi: 10.13145/bacdive160170.20240510.9
Name and taxonomic classification
LPSN
- @ref: 20215
- genus: Rhodococcus
- species: Rhodococcus erythropolis
- full scientific name: Rhodococcus erythropolis (Gray and Thornton 1928) Goodfellow and Alderson 1979 (Approved Lists 1980)
synonyms
@ref synonym 20215 Mycobacterium erythropolis 20215 Rhodococcus qingshengii 20215 Rhodococcus baikonurensis 20215 Rhodococcus jialingiae 20215 Rhodococcus enclensis 20215 Rhodococcus degradans
@ref: 67074
domain: Bacteria
phylum: Actinobacteria
class: Actinobacteria
order: Mycobacteriales
family: Nocardiaceae
genus: Rhodococcus
species: Rhodococcus erythropolis
full scientific name: Rhodococcus erythropolis (Gray and Thornton 1928) Goodfellow and Alderson 1979 emend. Nouioui et al. 2018
strain designation: CCMMB1294, GK12
type strain: no
Culture and growth conditions
culture medium
- @ref: 67074
- name: TRYPTICASE SOY BROTH AGAR (DSMZ Medium 535)
- growth: yes
- link: https://mediadive.dsmz.de/medium/535
- composition: Name: TRYPTICASE SOY BROTH AGAR (DSMZ Medium 535) Composition: Trypticase soy broth 30.0 g/l Agar 15.0 g/l Distilled water
culture temp
- @ref: 67074
- growth: positive
- type: growth
- temperature: 28
Isolation, sampling and environmental information
isolation
- @ref: 67074
- sample type: soil polluted with fuel and organic wastes
- geographic location: Nancy, Grandville Street, ancient ENSAIA, garden
- country: France
- origin.country: FRA
- continent: Europe
taxonmaps
- @ref: 69479
- File name: preview.99_846.png
- url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_10;96_181;97_585;98_672;99_846&stattab=map
- Last taxonomy: Nocardiaceae
- 16S sequence: JQ318030
- Sequence Identity:
- Total samples: 20877
- soil counts: 6519
- aquatic counts: 4956
- animal counts: 7047
- plant counts: 2355
Safety information
risk assessment
- @ref: 67074
- pathogenicity human: yes, in single cases
- biosafety level: 1
- biosafety level comment: Risk group (German classification)
Sequence information
16S sequences
- @ref: 67074
- description: Rhodococcus erythropolis strain GK12 16S ribosomal RNA gene, partial sequence
- accession: JQ318030
- length: 1290
- database: nuccore
- NCBI tax ID: 1833
External links
@ref: 67074
culture collection no.: DSM 102980
straininfo link
- @ref: 112443
- straininfo: 404583
Reference
| @id | authors | title | doi/url | catalogue |
|---|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | |
| 67074 | Curators of the DSMZ | https://www.dsmz.de/collection/catalogue/details/culture/DSM-102980 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 102980) | |
| 69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich. | MicrobeAtlas 1.0 beta | https://microbeatlas.org/ | |
| 112443 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | StrainInfo: A central database for resolving microbial strain identifiers | 10.60712/SI-ID404583.1 |