Strain identifier

BacDive ID: 15965

Type strain: No

Species: Streptomyces sp.

Strain Designation: 298

Strain history: <- J.P.T. Valkonen SLU, 298 <- Plant Biol. Dept. Univ. of Helsinki

NCBI tax ID(s): 243714 (species)

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General

@ref: 10525

BacDive-ID: 15965

DSM-Number: 41746

keywords: 16S sequence, Bacteria, mesophilic

description: Streptomyces sp. 298 is a mesophilic bacterium that was isolated from potato cv. Ukama.

NCBI tax id

  • NCBI tax id: 243714
  • Matching level: species

strain history

  • @ref: 10525
  • history: <- J.P.T. Valkonen SLU, 298 <- Plant Biol. Dept. Univ. of Helsinki

doi: 10.13145/bacdive15965.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/actinomycetota
  • domain: Bacteria
  • phylum: Actinomycetota
  • class: Actinomycetes
  • order: Kitasatosporales
  • family: Streptomycetaceae
  • genus: Streptomyces
  • species: Streptomyces sp.
  • full scientific name: Streptomyces Waksman and Henrici 1943 (Approved Lists 1980)

  • synonyms

    @refsynonym
    20215Microechinospora
    20215Carbonactinospora
    20215Actinosporangium
    20215Actinopycnidium
    20215Elytrosporangium
    20215Streptoverticillium
    20215Chainia
    20215Indiella
    20215Actinacidiphila
    20215Kitasatoa
    20215Microellobosporia

@ref: 10525

domain: Bacteria

phylum: Actinobacteria

class: Actinobacteria

order: Actinomycetales

family: Streptomycetaceae

genus: Streptomyces

species: Streptomyces sp.

full scientific name: Streptomyces sp.

strain designation: 298

type strain: no

Culture and growth conditions

culture medium

  • @ref: 10525
  • name: GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)
  • growth: yes
  • link: https://mediadive.dsmz.de/medium/65
  • composition: Name: GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) Composition: Agar 18.0 g/l Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l CaCO3 2.0 g/l Distilled water

culture temp

  • @ref: 10525
  • growth: positive
  • type: growth
  • temperature: 28
  • range: mesophilic

Isolation, sampling and environmental information

isolation

  • @ref: 10525
  • sample type: potato cv. Ukama
  • geographic location: Mikkeli
  • country: Finland
  • origin.country: FIN
  • continent: Europe

isolation source categories

Cat1Cat2Cat3
#Host#Plants#Herbaceous plants (Grass,Crops)
#Host Body-Site#Plant#Root (Rhizome)

taxonmaps

  • @ref: 69479
  • File name: preview.99_4214.png
  • url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_15;96_102;97_135;98_3178;99_4214&stattab=map
  • Last taxonomy: Streptomyces turgidiscabies
  • 16S sequence: Y15496
  • Sequence Identity:
  • Total samples: 1335
  • soil counts: 1131
  • aquatic counts: 82
  • animal counts: 69
  • plant counts: 53

Sequence information

16S sequences

@refdescriptionaccessionlengthdatabaseNCBI tax ID
20218Streptomyces sp. DSM 41746 clone ITS 16S-23S ribosomal RNA intergenic spacer, partial sequenceAY297022282ena243714
10525Streptomyces sp. 16S rRNA gene, strain 298Y154961479ena1931

External links

@ref: 10525

culture collection no.: DSM 41746

straininfo link

  • @ref: 85040
  • straininfo: 50097

Reference

@idauthorscataloguedoi/urltitlejournalpubmed
10525Curators of the DSMZLeibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 41746)https://www.dsmz.de/collection/catalogue/details/culture/DSM-41746
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.10.1099/ijsem.0.004332List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ
20218Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.10.1016/j.syapm.2013.11.002StrainInfo introduces electronic passports for microorganisms.Syst Appl Microbiol. 37: 42-50 201424321274
69479João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.https://microbeatlas.org/MicrobeAtlas 1.0 beta
85040Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.10.60712/SI-ID50097.1StrainInfo: A central database for resolving microbial strain identifiers