Strain identifier
BacDive ID: 159541
Type strain: 
Species: Brucella haematophila
Strain Designation: SSR
Strain history: <- S. Yasmin, National Institute for Biotechnology and Genetic Engineering, Faisalabad, Pakistan; SSR
NCBI tax ID(s): 419474 (species)
version 8.1 (current version)
General
@ref: 66367
BacDive-ID: 159541
DSM-Number: 109610
keywords: 16S sequence, Bacteria, mesophilic, human pathogen
description: Brucella haematophila SSR is a mesophilic human pathogen that was isolated from Soil.
NCBI tax id
- NCBI tax id: 419474
- Matching level: species
strain history
- @ref: 66367
- history: <- S. Yasmin, National Institute for Biotechnology and Genetic Engineering, Faisalabad, Pakistan; SSR
doi: 10.13145/bacdive159541.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/pseudomonadota
- domain: Bacteria
- phylum: Pseudomonadota
- class: Alphaproteobacteria
- order: Hyphomicrobiales
- family: Brucellaceae
- genus: Brucella
- species: Brucella haematophila
- full scientific name: Brucella haematophila (Kämpfer et al. 2007) Hördt et al. 2020
synonyms
- @ref: 20215
- synonym: Ochrobactrum haematophilum
@ref: 66367
domain: Bacteria
phylum: Proteobacteria
class: Alphaproteobacteria
order: Hyphomicrobiales
family: Brucellaceae
genus: Brucella
species: Brucella haematophila
full scientific name: Brucella haematophila (Kämpfer et al. 2007) Hördt et al. 2020
strain designation: SSR
type strain: no
Culture and growth conditions
culture medium
| @ref | name | growth | link | composition |
|---|---|---|---|---|
| 66367 | NUTRIENT AGAR (DSMZ Medium 1) | yes | https://mediadive.dsmz.de/medium/1 | Name: NUTRIENT AGAR (DSMZ Medium 1) Composition: Agar 15.0 g/l Peptone 5.0 g/l Meat extract 3.0 g/l Distilled water |
| 66367 | TRYPTICASE SOY BROTH AGAR (DSMZ Medium 535) | yes | https://mediadive.dsmz.de/medium/535 | Name: TRYPTICASE SOY BROTH AGAR (DSMZ Medium 535) Composition: Trypticase soy broth 30.0 g/l Agar 15.0 g/l Distilled water |
culture temp
- @ref: 66367
- growth: positive
- type: growth
- temperature: 37
- range: mesophilic
Physiology and metabolism
metabolite utilization
| @ref | Chebi-ID | metabolite | utilization activity | kind of utilization tested |
|---|---|---|---|---|
| 68369 | 25115 | malate | + | assimilation |
| 68369 | 17128 | adipate | - | assimilation |
| 68369 | 27689 | decanoate | + | assimilation |
| 68369 | 24265 | gluconate | + | assimilation |
| 68369 | 17306 | maltose | + | assimilation |
| 68369 | 59640 | N-acetylglucosamine | + | assimilation |
| 68369 | 16899 | D-mannitol | + | assimilation |
| 68369 | 16024 | D-mannose | + | assimilation |
| 68369 | 30849 | L-arabinose | + | assimilation |
| 68369 | 17634 | D-glucose | + | assimilation |
| 68369 | 5291 | gelatin | - | hydrolysis |
| 68369 | 4853 | esculin | + | hydrolysis |
| 68369 | 16199 | urea | + | hydrolysis |
| 68369 | 29016 | arginine | + | hydrolysis |
| 68369 | 17634 | D-glucose | - | fermentation |
| 68369 | 27897 | tryptophan | - | energy source |
| 68369 | 17632 | nitrate | - | reduction |
metabolite production
- @ref: 68369
- Chebi-ID: 35581
- metabolite: indole
- production: no
metabolite tests
- @ref: 68369
- Chebi-ID: 35581
- metabolite: indole
- indole test: -
enzymes
| @ref | value | activity | ec |
|---|---|---|---|
| 68369 | cytochrome oxidase | + | 1.9.3.1 |
| 68369 | gelatinase | - | |
| 68369 | beta-glucosidase | + | 3.2.1.21 |
| 68369 | urease | + | 3.5.1.5 |
| 68369 | arginine dihydrolase | + | 3.5.3.6 |
API 20NE
| @ref | NO3 | TRP | GLU_ Ferm | ADH Arg | URE | ESC | GEL | PNPG | GLU_ Assim | ARA | MNE | MAN | NAG | MAL | GNT | CAP | ADI | MLT | CIT | PAC | OX |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 66367 | - | - | - | + | + | + | - | - | + | + | + | + | + | + | + | + | - | + | - | - | + |
Isolation, sampling and environmental information
isolation
- @ref: 66367
- sample type: Soil
- geographic location: Pindi bhattian, Punjab (31° 53' 45'' N, 73° 16' 34'' E)
- country: Pakistan
- origin.country: PAK
- continent: Asia
- latitude: 31.8958
- longitude: 73.2761
isolation source categories
- Cat1: #Environmental
- Cat2: #Terrestrial
- Cat3: #Soil
Safety information
risk assessment
- @ref: 66367
- pathogenicity human: yes, in single cases
- biosafety level: 1
- biosafety level comment: Risk group (German classification)
Sequence information
16S sequences
- @ref: 66367
- description: Ochrobactrum haematophilum strain SSR 16S ribosomal RNA gene, partial sequence
- accession: MK422612
- length: 782
- database: ena
- NCBI tax ID: 419474
External links
@ref: 66367
culture collection no.: DSM 109610
straininfo link
- @ref: 112021
- straininfo: 400376
Reference
| @id | authors | title | doi/url | catalogue |
|---|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | |
| 66367 | Curators of the DSMZ | https://www.dsmz.de/collection/catalogue/details/culture/DSM-109610 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 109610) | |
| 68369 | Automatically annotated from API 20NE | |||
| 112021 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | StrainInfo: A central database for resolving microbial strain identifiers | 10.60712/SI-ID400376.1 |