Strain identifier

BacDive ID: 159483

Type strain: No

Species: Gracilibacillus eburneus

Strain history: <- S.-K. Tang, YIM; YIM 93565 <- S.-K. Tang and C. Chen

NCBI tax ID(s): 1425361 (species)

For citation purpose refer to the digital object identifier (doi) of the current version.
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General

@ref: 66306

BacDive-ID: 159483

DSM-Number: 23710

keywords: 16S sequence, Bacteria

description: Gracilibacillus eburneus DSM 23710 is a bacterium that was isolated from salt lake.

NCBI tax id

  • NCBI tax id: 1425361
  • Matching level: species

strain history

  • @ref: 66306
  • history: <- S.-K. Tang, YIM; YIM 93565 <- S.-K. Tang and C. Chen

doi: 10.13145/bacdive159483.20240510.9

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/bacillota
  • domain: Bacteria
  • phylum: Bacillota
  • class: Bacilli
  • order: Caryophanales
  • family: Bacillaceae
  • genus: Gracilibacillus
  • species: Gracilibacillus eburneus
  • full scientific name: Gracilibacillus eburneus Guan et al. 2018

@ref: 66306

domain: Bacteria

phylum: Firmicutes

class: Bacilli

order: Caryophanales

family: Bacillaceae

genus: Gracilibacillus

species: Gracilibacillus eburneus

full scientific name: Gracilibacillus eburneus Guan et al. 2018

type strain: no

Culture and growth conditions

culture medium

  • @ref: 66306
  • name: BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514)
  • growth: yes
  • link: https://mediadive.dsmz.de/medium/514
  • composition: Name: BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514; with strain-specific modifications) Composition: NaCl 70.0 g/l MgCl2 5.9 g/l Bacto peptone 5.0 g/l Na2SO4 3.24 g/l CaCl2 1.8 g/l Yeast extract 1.0 g/l KCl 0.55 g/l NaHCO3 0.16 g/l Fe(III) citrate 0.1 g/l KBr 0.08 g/l SrCl2 0.034 g/l H3BO3 0.022 g/l Na2HPO4 0.008 g/l Na-silicate 0.004 g/l NaF 0.0024 g/l (NH4)NO3 0.0016 g/l Distilled water

culture temp

  • @ref: 66306
  • growth: positive
  • type: growth
  • temperature: 30

Isolation, sampling and environmental information

isolation

  • @ref: 66306
  • sample type: salt lake
  • geographic location: Xinjiang
  • country: China
  • origin.country: CHN
  • continent: Asia

isolation source categories

Cat1Cat2Cat3
#Environmental#Aquatic#Lake (large)
#Condition#Saline

taxonmaps

  • @ref: 69479
  • File name: preview.99_44065.png
  • url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_3;96_2444;97_25223;98_31980;99_44065&stattab=map
  • Last taxonomy: Gracilibacillus
  • 16S sequence: KF548095
  • Sequence Identity:
  • Total samples: 67
  • soil counts: 30
  • aquatic counts: 9
  • animal counts: 27
  • plant counts: 1

Sequence information

16S sequences

  • @ref: 66306
  • description: Gracilibacillus eburneus 16S ribosomal RNA gene, partial sequence
  • accession: KF548095
  • length: 1539
  • database: nuccore
  • NCBI tax ID: 1425361

External links

@ref: 66306

culture collection no.: DSM 23710, YIM 93565

literature

  • topic: Phylogeny
  • Pubmed-ID: 29184975
  • title: Gracilibacillus eburneus sp.nov., a moderately halophilic bacterium isolated from Xinjiang province, China.
  • authors: Guan HL, Zhang YJ, Lu XJ, Jia M, Zhang ZY, Gao XH, Ma YC, Tian F, Tang SK
  • journal: Arch Microbiol
  • DOI: 10.1007/s00203-017-1450-6
  • year: 2017
  • mesh: Bacillaceae/*classification/genetics/isolation & purification, Base Composition, Cell Wall/chemistry, China, DNA, Bacterial/genetics, Diaminopimelic Acid/analysis/chemistry, Fatty Acids/analysis/chemistry, Lakes/microbiology, Molecular Typing, Phospholipids/analysis/chemistry, Phylogeny, RNA, Ribosomal, 16S/genetics, Salt Tolerance, Water Microbiology
  • topic2: Enzymology

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
66306Curators of the DSMZhttps://www.dsmz.de/collection/catalogue/details/culture/DSM-23710Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 23710)
69479João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.MicrobeAtlas 1.0 betahttps://microbeatlas.org/