Strain identifier
BacDive ID: 159472
Type strain: 
Species: Enterobacter asburiae
Strain Designation: WB01-D5-07-AE
Strain history: <- E. Allen-Vercoe, Univ. Guelph, Ontario, Canada; WB01-D5-07-AE
NCBI tax ID(s): 61645 (species)
version 9 (current version)
General
@ref: 66295
BacDive-ID: 159472
DSM-Number: 105330
keywords: 16S sequence, Bacteria
description: Enterobacter asburiae WB01-D5-07-AE is a bacterium that was isolated from wild boar.
NCBI tax id
- NCBI tax id: 61645
- Matching level: species
strain history
- @ref: 66295
- history: <- E. Allen-Vercoe, Univ. Guelph, Ontario, Canada; WB01-D5-07-AE
doi: 10.13145/bacdive159472.20240510.9
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/pseudomonadota
- domain: Bacteria
- phylum: Pseudomonadota
- class: Gammaproteobacteria
- order: Enterobacterales
- family: Enterobacteriaceae
- genus: Enterobacter
- species: Enterobacter asburiae
- full scientific name: Enterobacter asburiae Brenner et al. 1988
synonyms
- @ref: 20215
- synonym: Enterobacter muelleri
@ref: 66295
domain: Bacteria
phylum: Proteobacteria
class: Gammaproteobacteria
order: Enterobacterales
family: Enterobacteriaceae
genus: Enterobacter
species: Enterobacter asburiae
full scientific name: Enterobacter asburiae Brenner et al. 1988 emend. Hoffmann et al. 2005
strain designation: WB01-D5-07-AE
type strain: no
Culture and growth conditions
culture medium
- @ref: 66295
- name: TRYPTICASE SOY BROTH AGAR (DSMZ Medium 535)
- growth: yes
- link: https://mediadive.dsmz.de/medium/535
- composition: Name: TRYPTICASE SOY BROTH AGAR (DSMZ Medium 535) Composition: Trypticase soy broth 30.0 g/l Agar 15.0 g/l Distilled water
culture temp
- @ref: 66295
- growth: positive
- type: growth
- temperature: 30
Physiology and metabolism
metabolite utilization
| @ref | Chebi-ID | metabolite | utilization activity | kind of utilization tested |
|---|---|---|---|---|
| 68368 | 17632 | nitrate | + | reduction |
| 68368 | 30849 | L-arabinose | + | fermentation |
| 68368 | 27613 | amygdalin | + | fermentation |
| 68368 | 28053 | melibiose | - | fermentation |
| 68368 | 17992 | sucrose | + | fermentation |
| 68368 | 62345 | L-rhamnose | - | fermentation |
| 68368 | 30911 | sorbitol | + | fermentation |
| 68368 | 17268 | myo-inositol | - | fermentation |
| 68368 | 16899 | D-mannitol | + | fermentation |
| 68368 | 17634 | D-glucose | + | fermentation |
| 68368 | 5291 | gelatin | - | hydrolysis |
| 68368 | 27897 | tryptophan | - | energy source |
| 68368 | 16199 | urea | - | hydrolysis |
| 68368 | 16947 | citrate | + | assimilation |
| 68368 | 18257 | ornithine | + | degradation |
| 68368 | 25094 | lysine | - | degradation |
| 68368 | 29016 | arginine | + | hydrolysis |
metabolite production
| @ref | Chebi-ID | metabolite | production |
|---|---|---|---|
| 68368 | 16301 | nitrite | yes |
| 68368 | 15688 | acetoin | yes |
| 68368 | 35581 | indole | no |
| 68368 | 16136 | hydrogen sulfide | no |
metabolite tests
| @ref | Chebi-ID | metabolite | voges-proskauer-test | indole test |
|---|---|---|---|---|
| 68368 | 15688 | acetoin | + | |
| 68368 | 35581 | indole | - |
enzymes
| @ref | value | activity | ec |
|---|---|---|---|
| 68368 | gelatinase | - | |
| 68368 | tryptophan deaminase | - | 4.1.99.1 |
| 68368 | urease | - | 3.5.1.5 |
| 68368 | ornithine decarboxylase | + | 4.1.1.17 |
| 68368 | lysine decarboxylase | - | 4.1.1.18 |
| 68368 | arginine dihydrolase | + | 3.5.3.6 |
| 68368 | beta-galactosidase | + | 3.2.1.23 |
API 20E
| @ref | ONPG | ADH Arg | LDC Lys | ODC | CIT | H2S | URE | TDA Trp | IND | VP | GEL | GLU | MAN | INO | Sor | RHA | SAC | MEL | AMY | ARA | NO2 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 66295 | + | + | - | + | + | - | - | - | - | + | - | + | + | - | + | - | + | - | + | + | + |
Isolation, sampling and environmental information
isolation
- @ref: 66295
- sample type: wild boar
- geographic location: Stratford, Ontario
- country: Canada
- origin.country: CAN
- continent: North America
isolation source categories
- Cat1: #Host
- Cat2: #Mammals
- Cat3: #Suidae (Pig,Swine)
Safety information
risk assessment
- @ref: 66295
- biosafety level: 2
- biosafety level comment: Risk group (German classification)
Sequence information
16S sequences
- @ref: 66295
- description: Enterobacter sp. strain DSM 105330 16S ribosomal RNA gene, partial sequence
- accession: MN537486
- length: 1426
- database: nuccore
- NCBI tax ID: 42895
External links
@ref: 66295
culture collection no.: DSM 105330
straininfo link
- @ref: 111963
- straininfo: 406352
Reference
| @id | authors | title | doi/url | catalogue |
|---|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | |
| 66295 | Curators of the DSMZ | https://www.dsmz.de/collection/catalogue/details/culture/DSM-105330 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 105330) | |
| 68368 | Automatically annotated from API 20E | |||
| 111963 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | StrainInfo: A central database for resolving microbial strain identifiers | 10.60712/SI-ID406352.1 |