Strain identifier
BacDive ID: 159469
Type strain: 
Species: Actinopolyspora sp.
Strain Designation: H148
Strain history: <- N. Sabaou, Kouba,Alger,Algeria; H148 <- A. Meklat et al.
NCBI tax ID(s): 2586995 (species)
version 9.1 (current version)
General
@ref: 66292
BacDive-ID: 159469
DSM-Number: 45965
keywords: genome sequence, Bacteria, spore-forming, Gram-positive
description: Actinopolyspora sp. H148 is a spore-forming, Gram-positive bacterium that was isolated from soil.
NCBI tax id
- NCBI tax id: 2586995
- Matching level: species
strain history
- @ref: 66292
- history: <- N. Sabaou, Kouba,Alger,Algeria; H148 <- A. Meklat et al.
doi: 10.13145/bacdive159469.20240916.9.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/actinomycetota
- domain: Bacteria
- phylum: Actinomycetota
- class: Actinomycetes
- order: Pseudonocardiales
- family: Pseudonocardiaceae
- genus: Actinopolyspora
- species: Actinopolyspora sp.
- full scientific name: Actinopolyspora Gochnauer et al. 1975 (Approved Lists 1980)
@ref: 66292
domain: Bacteria
phylum: Actinobacteria
class: Actinobacteria
order: Actinopolysporales
family: Actinopolysporaceae
genus: Actinopolyspora
species: Actinopolyspora sp.
full scientific name: Actinopolyspora sp.
strain designation: H148
type strain: no
Morphology
cell morphology
| @ref | motility | confidence | gram stain |
|---|---|---|---|
| 69480 | no | 91 | |
| 69480 | 92.566 | positive |
multimedia
- @ref: 66292
- multimedia content: https://www.dsmz.de/microorganisms/photos/DSM_45965.jpg
- caption: Medium 1504 28°C
- intellectual property rights: © Leibniz-Institut DSMZ
Culture and growth conditions
culture medium
- @ref: 66292
- name: CM-MEDIUM (DSMZ Medium 1504)
- growth: yes
- link: https://mediadive.dsmz.de/medium/1504
- composition: Name: CM MEDIUM (DSMZ Medium 1504) Composition: NaCl 150.0 g/l Agar 20.0 g/l MgSO4 x 7 H2O 10.0 g/l Yeast extract 10.0 g/l Peptone 7.5 g/l Na3-citrate 3.0 g/l KCl 2.0 g/l FeSO4 x 7 H2O Distilled water
culture temp
- @ref: 66292
- growth: positive
- type: growth
- temperature: 28
Physiology and metabolism
spore formation
- @ref: 69481
- spore formation: yes
- confidence: 100
Isolation, sampling and environmental information
isolation
- @ref: 66292
- sample type: soil
- geographic location: Ahbas
- country: Algeria
- origin.country: DZA
- continent: Africa
Sequence information
Genome sequences
| @ref | description | accession | assembly level | database | NCBI tax ID |
|---|---|---|---|---|---|
| 66792 | Actinopolyspora sp. DSM 45965 | 2586995.3 | wgs | patric | 2586995 |
| 66792 | Actinopolyspora sp. DSM 45965 | 2818991418 | draft | img | 2586995 |
Genome-based predictions
predictions
| @ref | trait | model | description | prediction | confidence | training_data |
|---|---|---|---|---|---|---|
| 69481 | spore-forming | spore-forming | Ability to form endo- or exospores | yes | 100 | no |
| 69480 | gram-positive | gram-positive | Positive reaction to Gram-staining | yes | 92.566 | no |
| 69480 | anaerobic | anaerobic | Ability to grow under anoxygenic conditions (including facultative anaerobes) | no | 94.984 | no |
| 69480 | spore-forming | spore-forming | Ability to form endo- or exospores | yes | 84.621 | no |
| 69480 | thermophilic | thermophile | Ability to grow at temperatures above or equal to 45°C | no | 94.144 | no |
| 69480 | aerobic | aerobic | Ability to grow under oxygenic conditions (including facultative aerobes) | yes | 89.709 | no |
| 69480 | flagellated | motile2+ | Ability to perform flagellated movement | no | 91 | no |
External links
@ref: 66292
culture collection no.: DSM 45965
straininfo link
- @ref: 111960
- straininfo: 399825
Reference
| @id | authors | title | doi/url | catalogue |
|---|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | |
| 66292 | Curators of the DSMZ | https://www.dsmz.de/collection/catalogue/details/culture/DSM-45965 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 45965) | |
| 66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | https://diaspora-project.de/progress.html#genomes | |
| 69480 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | https://diaspora-project.de/progress.html#genomes | |
| 69481 | Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch | Predictions based on the model GenomeNet Sporulation v. 1 | 10.21203/rs.3.rs-2527258/v1 | |
| 111960 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | StrainInfo: A central database for resolving microbial strain identifiers | 10.60712/SI-ID399825.1 |