Strain identifier
BacDive ID: 159421
Type strain: 
Species: Blastococcus sp.
Strain Designation: TPS166
Strain history: <- G. Y. A. Tan, Universiti Malaya, Kuala Lumpur,Malaysia; TPS166 <- Z. Y. Ng, Universiti Malaya
NCBI tax ID(s): 1873459 (species)
General
@ref: 66244
BacDive-ID: 159421
DSM-Number: 46827
keywords: 16S sequence, Bacteria, mesophilic
description: Blastococcus sp. TPS166 is a mesophilic bacterium that was isolated from marine sediments collected at a 7 m depth.
NCBI tax id
- NCBI tax id: 1873459
- Matching level: species
strain history
- @ref: 66244
- history: <- G. Y. A. Tan, Universiti Malaya, Kuala Lumpur,Malaysia; TPS166 <- Z. Y. Ng, Universiti Malaya
doi: 10.13145/bacdive159421.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/actinomycetota
- domain: Bacteria
- phylum: Actinomycetota
- class: Actinomycetes
- order: Geodermatophilales
- family: Geodermatophilaceae
- genus: Blastococcus
- species: Blastococcus sp.
- full scientific name: Blastococcus Ahrens and Moll 1970 (Approved Lists 1980)
@ref: 66244
domain: Bacteria
phylum: Actinobacteria
class: Actinobacteria
order: Geodermatophilales
family: Geodermatophilaceae
genus: Blastococcus
species: Blastococcus sp.
full scientific name: Blastococcus sp.
strain designation: TPS166
type strain: no
Morphology
multimedia
- @ref: 66244
- multimedia content: https://www.dsmz.de/microorganisms/photos/DSM_46827.jpg
- caption: Medium 65 28°C
- intellectual property rights: © Leibniz-Institut DSMZ
Culture and growth conditions
culture medium
| @ref | name | growth | link | composition |
|---|---|---|---|---|
| 66244 | BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514) | yes | https://www.dsmz.de/microorganisms/medium/pdf/DSMZ_Medium514.pdf | |
| 66244 | GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) | yes | https://mediadive.dsmz.de/medium/65 | Name: GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) Composition: Agar 18.0 g/l Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l CaCO3 2.0 g/l Distilled water |
culture temp
- @ref: 66244
- growth: positive
- type: growth
- temperature: 28
- range: mesophilic
Isolation, sampling and environmental information
isolation
- @ref: 66244
- sample type: marine sediments collected at a 7 m depth
- geographic location: Pahang, Tioman Island, Pirate Reef
- country: Malaysia
- origin.country: MYS
- continent: Asia
isolation source categories
| Cat1 | Cat2 | Cat3 |
|---|---|---|
| #Environmental | #Aquatic | #Marine |
| #Environmental | #Aquatic | #Sediment |
taxonmaps
- @ref: 69479
- File name: preview.99_176874.png
- url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_94;96_1096;97_85137;98_115569;99_176874&stattab=map
- Last taxonomy: Blastococcus
- 16S sequence: KM273128
- Sequence Identity:
- Total samples: 50
- soil counts: 32
- aquatic counts: 7
- animal counts: 5
- plant counts: 6
Sequence information
16S sequences
- @ref: 66244
- description: Blastococcus sp. TPS166 16S ribosomal RNA gene, partial sequence
- accession: KM273128
- length: 1356
- database: ena
- NCBI tax ID: 1570097
External links
@ref: 66244
culture collection no.: DSM 46827
straininfo link
- @ref: 111915
- straininfo: 399781
Reference
| @id | authors | title | doi/url | catalogue |
|---|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | |
| 66244 | Curators of the DSMZ | https://www.dsmz.de/collection/catalogue/details/culture/DSM-46827 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 46827) | |
| 69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich. | MicrobeAtlas 1.0 beta | https://microbeatlas.org/ | |
| 111915 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | StrainInfo: A central database for resolving microbial strain identifiers | 10.60712/SI-ID399781.1 |