Strain identifier

BacDive ID: 158662

Type strain: Yes

Species: Streptomyces salilacus

NCBI tax ID(s): 1813820 (species)

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General

@ref: 65389

BacDive-ID: 158662

keywords: 16S sequence, Bacteria, aerobe, spore-forming, Gram-positive

description: Streptomyces salilacus CCTCC AA 2015030 is an aerobe, spore-forming, Gram-positive bacterium that was isolated from sediment sample .

NCBI tax id

  • NCBI tax id: 1813820
  • Matching level: species

doi: 10.13145/bacdive158662.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/actinomycetota
  • domain: Bacteria
  • phylum: Actinomycetota
  • class: Actinomycetes
  • order: Kitasatosporales
  • family: Streptomycetaceae
  • genus: Streptomyces
  • species: Streptomyces salilacus
  • full scientific name: Streptomyces salilacus Luo et al. 2018

@ref: 65389

domain: Bacteria

phylum: Actinobacteria

class: Actinobacteria

order: Streptomycetales

family: Streptomycetaceae

genus: Streptomyces

species: Streptomyces salilacus

type strain: yes

Morphology

cell morphology

  • @ref: 65389
  • gram stain: positive

Culture and growth conditions

culture medium

@refnamegrowth
65389IPS1yes
65389Czapek's agar mediumyes
65389IPS2yes
65389ISP5yes
65389ISP7yes
65389Nutrient agar (NA)yes
65389Gauze's Medium No. 1yes
65389ISP3yes
65389ISP4yes
65389ISP6no

culture temp

@refgrowthtypetemperaturerange
65389positivegrowth25-50
65389positiveoptimum28mesophilic

culture pH

@refabilitytypepHPH range
65389positivegrowth6-12alkaliphile
65389positiveoptimum7-9

Physiology and metabolism

oxygen tolerance

  • @ref: 65389
  • oxygen tolerance: aerobe

spore formation

  • @ref: 65389
  • spore description: Oval-shaped spores form at the end of the aerial mycelium.
  • type of spore: spore
  • spore formation: yes

halophily

  • @ref: 65389
  • salt: NaCl
  • growth: positive
  • tested relation: optimum
  • concentration: 1 %(w/v)

observation

  • @ref: 65389
  • observation: Gram-positive actinomycete with sparse but extensively branched aerial mycelium.

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
6538922599arabinose-carbon source
6538917057cellobiose-carbon source
6538962968cellulose+hydrolysis
6538916261chitosan-carbon source
6538915824D-fructose+carbon source
6538912936D-galactose-carbon source
6538965327D-xylose-carbon source
653895291gelatin-hydrolysis
6538917234glucose+carbon source
6538918287L-fucose+carbon source
6538962345L-rhamnose-carbon source
6538917266L-sorbose-carbon source
6538917716lactose-carbon source
6538917306maltose-carbon source
653896731melezitose-carbon source
65389milk+assimilation
6538917632nitrate+reduction
6538916634raffinose-carbon source
6538933942ribose-carbon source
6538916464salicyl alcohol-carbon source
6538928017starch+hydrolysis
6538917992sucrose-carbon source
6538953424tween 20+hydrolysis
6538953423tween 40+hydrolysis
6538953425tween 60+hydrolysis
6538953426tween 80+hydrolysis
6538937166xylan-carbon source
6538917151xylitol-carbon source

metabolite production

@refChebi-IDmetaboliteproduction
6538916136hydrogen sulfideno
6538989634melaninno

enzymes

@refvalueactivityec
65389catalase+1.11.1.6
65389cytochrome oxidase+1.9.3.1
65389urease-3.5.1.5

Isolation, sampling and environmental information

isolation

  • @ref: 65389
  • sample type: sediment sample (1-15 cm surface soil samples)
  • geographic location: Xiaoerkule salt lake located at Atushi city
  • country: China
  • origin.country: CHN
  • continent: Asia
  • latitude: 40.1666
  • longitude: 76.8833
  • enrichment culture: IPS 4 with 1.5 % (w/v) NaCl
  • enrichment culture composition: (per litre distilled water): 5.0 g trehalose, 1.0 g creatine, 1.0 g K2HPO4, 1.0 g MgSO4 x 7H2O, 0.2 g CaCO3, 0.01 g FeSO4 x 7H2O and 18 g agar
  • enrichment culture duration: 5 days
  • enrichment culture temperature: 28
  • isolation procedure: aerobic incubation

isolation source categories

  • Cat1: #Environmental
  • Cat2: #Aquatic
  • Cat3: #Sediment

taxonmaps

  • @ref: 69479
  • File name: preview.99_154702.png
  • url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_15;96_2143;97_55410;98_73332;99_154702&stattab=map
  • Last taxonomy: Streptomyces salilacus subclade
  • 16S sequence: KU860456
  • Sequence Identity:
  • Total samples: 667
  • soil counts: 393
  • aquatic counts: 78
  • animal counts: 166
  • plant counts: 30

Sequence information

16S sequences

  • @ref: 65389
  • description: 16S rRNA gene sequence
  • accession: KU860456
  • database: nuccore

GC content

  • @ref: 65389
  • GC-content: 75
  • method: high performance liquid chromatography (HPLC)

External links

@ref: 65389

culture collection no.: CCTCC AA 2015030, KCTC 39726, TRM 41337

literature

  • topic: Phylogeny
  • Pubmed-ID: 29580317
  • title: Streptomyces salilacus sp. nov., an actinomycete isolated from a salt lake.
  • authors: Luo XX, Gao GB, Xia ZF, Chen ZJ, Wan CX, Zhang LL
  • journal: Int J Syst Evol Microbiol
  • DOI: 10.1099/ijsem.0.002703
  • year: 2018
  • mesh: Bacterial Typing Techniques, Base Composition, China, DNA, Bacterial/genetics, Diaminopimelic Acid/chemistry, Fatty Acids/chemistry, Lakes/*microbiology, Phospholipids/chemistry, *Phylogeny, RNA, Ribosomal, 16S/genetics, *Salinity, Sequence Analysis, DNA, Streptomyces/*classification/genetics/isolation & purification, Vitamin K 2/analogs & derivatives/chemistry
  • topic2: Transcriptome

Reference

@idauthorstitledoi/urljournalpubmed
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
65389Xiao-Xia Luo, Guang-Bin Gao, Zhan-Feng Xia, Zheng-Jun Chen, Chuan-Xing Wan, Li-Li ZhangStreptomyces salilacus sp. nov., an actinomycete isolated from a salt lake10.1099/ijsem.0.002703IJSEM 68: 1514-1518 201829580317
69479João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.MicrobeAtlas 1.0 betahttps://microbeatlas.org/