Strain identifier
BacDive ID: 158223
Type strain: 
Species: Methylophilus quaylei
Strain Designation: MT
Strain history: N. V. Doronina; G. K. Skryabin Inst. of Biochem. & Physiol. of Microorg., RAS, Russia; MT.
NCBI tax ID(s): 313369 (species)
version 8.1 (current version)
General
@ref: 64843
BacDive-ID: 158223
DSM-Number: 23074
keywords: 16S sequence, Bacteria, mesophilic
description: Methylophilus quaylei MT is a mesophilic bacterium that was isolated from airborne contaminant of methanotrophic culture in the Moscow fermentation plant.
NCBI tax id
- NCBI tax id: 313369
- Matching level: species
strain history
| @ref | history |
|---|---|
| 64843 | <- Y. A. Trotsenko, Inst. Biochem. Physiol. Microorg., RAS, Pushchino, Russia; MT <- N. V. Doronina |
| 67770 | N. V. Doronina; G. K. Skryabin Inst. of Biochem. & Physiol. of Microorg., RAS, Russia; MT. |
doi: 10.13145/bacdive158223.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/pseudomonadota
- domain: Bacteria
- phylum: Pseudomonadota
- class: Betaproteobacteria
- order: Nitrosomonadales
- family: Methylophilaceae
- genus: Methylophilus
- species: Methylophilus quaylei
- full scientific name: Methylophilus quaylei Doronina et al. 2017
@ref: 64843
domain: Bacteria
phylum: Proteobacteria
class: Betaproteobacteria
order: Methylococcales
family: Methylophilaceae
genus: Methylophilus
species: Methylophilus quaylei
full scientific name: Methylophilus quaylei Doronina et al. 2017
strain designation: MT
type strain: yes
Culture and growth conditions
culture medium
- @ref: 64843
- name: MEDIUM K (DSMZ Medium 1122)
- growth: yes
- link: https://mediadive.dsmz.de/medium/1122
- composition: Name: MEDIUM K (DSMZ Medium 1122) Composition: Agar 20.0 g/l KH2PO4 2.0 g/l (NH4)2SO4 2.0 g/l NaCl 0.5 g/l MgSO4 x 7 H2O 0.125 g/l FeSO4 x 7 H2O 0.002 g/l Methanol Distilled water
culture temp
| @ref | growth | type | temperature | range |
|---|---|---|---|---|
| 64843 | positive | growth | 28 | mesophilic |
| 67770 | positive | growth | 29 | mesophilic |
Isolation, sampling and environmental information
isolation
- @ref: 64843
- sample type: airborne contaminant of methanotrophic culture in the Moscow fermentation plant
- geographic location: Moscow
- country: Russia
- origin.country: RUS
- continent: Europe
isolation source categories
| Cat1 | Cat2 | Cat3 |
|---|---|---|
| #Engineered | #Industrial | #Plant (Factory) |
| #Environmental | #Air | |
| #Engineered | #Contamination |
taxonmaps
- @ref: 69479
- File name: preview.99_1013.png
- url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_174;96_581;97_680;98_790;99_1013&stattab=map
- Last taxonomy: Methylophilus
- 16S sequence: AY772089
- Sequence Identity:
- Total samples: 4460
- soil counts: 376
- aquatic counts: 1592
- animal counts: 2109
- plant counts: 383
Safety information
risk assessment
- @ref: 64843
- biosafety level: 1
- biosafety level comment: Risk group (German classification)
Sequence information
16S sequences
- @ref: 64843
- description: Methylophilus quaylei strain MT 16S ribosomal RNA gene, partial sequence
- accession: AY772089
- length: 1442
- database: ena
- NCBI tax ID: 313369
GC content
| @ref | GC-content |
|---|---|
| 64843 | 54.0 |
| 67770 | 54 |
External links
@ref: 64843
culture collection no.: DSM 23074, VKM B-2338, JCM 31521
straininfo link
- @ref: 111046
- straininfo: 406284
literature
- topic: Phylogeny
- Pubmed-ID: 15997702
- title: Methylophilus quaylei sp. nov., a new aerobic obligately methylotrophic bacterium.
- authors: Doronina N, Ivanova E, Trotsenko Y, Pshenichnikova A, Kalinina E, Shvets V
- journal: Syst Appl Microbiol
- DOI: 10.1016/j.syapm.2005.02.002
- year: 2005
- mesh: Aerobiosis, Base Composition, DNA, Bacterial/chemistry/isolation & purification, DNA, Ribosomal/chemistry/isolation & purification, Environmental Microbiology, Genes, rRNA, Glutamate Dehydrogenase/analysis, Glutamate Synthase, Glutamate-Ammonia Ligase/analysis, Hydrogen-Ion Concentration, Ketoglutarate Dehydrogenase Complex/analysis, Lipids/analysis, Methanol/*metabolism, Methylophilus/*classification/cytology/*isolation & purification/physiology, Molecular Sequence Data, Phylogeny, Polysaccharides, Bacterial/biosynthesis, Quaternary Ammonium Compounds/metabolism, RNA, Ribosomal, 16S/genetics, Sequence Analysis, DNA, Temperature, Ubiquinone/analysis
- topic2: Enzymology
Reference
| @id | authors | title | doi/url | catalogue |
|---|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | |
| 64843 | Curators of the DSMZ | https://www.dsmz.de/collection/catalogue/details/culture/DSM-23074 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 23074) | |
| 67770 | Curators of the JCM | https://jcm.brc.riken.jp/en/ | ||
| 69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich. | MicrobeAtlas 1.0 beta | https://microbeatlas.org/ | |
| 111046 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | StrainInfo: A central database for resolving microbial strain identifiers | 10.60712/SI-ID406284.1 |