Strain identifier
BacDive ID: 158079
Type strain: 
Species: Ruminococcus sp.
Strain Designation: H5_33
Strain history: <- H. Browne, Wellcome Trust Sanger Institute, Hinxton, Cambridgeshire, United Kingdom; H5_33
NCBI tax ID(s): 41978 (species)
version 8.1 (current version)
General
@ref: 64653
BacDive-ID: 158079
DSM-Number: 108255
keywords: Bacteria, mesophilic
description: Ruminococcus sp. H5_33 is a mesophilic bacterium that was isolated from human faeces.
NCBI tax id
- NCBI tax id: 41978
- Matching level: species
strain history
- @ref: 64653
- history: <- H. Browne, Wellcome Trust Sanger Institute, Hinxton, Cambridgeshire, United Kingdom; H5_33
doi: 10.13145/bacdive158079.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/bacillota
- domain: Bacteria
- phylum: Bacillota
- class: Clostridia
- order: Eubacteriales
- family: Oscillospiraceae
- genus: Ruminococcus
- species: Ruminococcus sp.
- full scientific name: Ruminococcus Sijpesteijn 1948 (Approved Lists 1980)
@ref: 64653
domain: Bacteria
phylum: Firmicutes
class: Clostridia
order: Clostridiales
family: Oscillospiraceae
genus: Ruminococcus
species: Ruminococcus sp.
full scientific name: Ruminococcus sp.
strain designation: H5_33
type strain: no
Culture and growth conditions
culture medium
- @ref: 64653
- name: PYG MEDIUM (MODIFIED) (DSMZ Medium 104)
- growth: yes
- link: https://mediadive.dsmz.de/medium/104
- composition: Name: PYG MEDIUM (modified) (DSMZ Medium 104) Composition: Yeast extract 10.0 g/l Peptone 5.0 g/l Trypticase peptone 5.0 g/l Beef extract 5.0 g/l Glucose 5.0 g/l L-Cysteine HCl x H2O 0.5 g/l NaHCO3 0.4 g/l NaCl 0.08 g/l K2HPO4 0.04 g/l KH2PO4 0.04 g/l MgSO4 x 7 H2O 0.02 g/l CaCl2 x 2 H2O 0.01 g/l Hemin 0.005 g/l Ethanol 0.0038 g/l Resazurin 0.001 g/l Tween 80 Vitamin K1 NaOH Distilled water
culture temp
- @ref: 64653
- growth: positive
- type: growth
- temperature: 37
- range: mesophilic
Isolation, sampling and environmental information
isolation
- @ref: 64653
- sample type: human faeces
- geographic location: Cambridgeshire
- country: United Kingdom
- origin.country: GBR
- continent: Europe
isolation source categories
| Cat1 | Cat2 | Cat3 |
|---|---|---|
| #Host | #Human | |
| #Host Body Product | #Gastrointestinal tract | #Feces (Stool) |
External links
@ref: 64653
culture collection no.: DSM 108255
straininfo link
- @ref: 110922
- straininfo: 398348
Reference
| @id | authors | title | doi/url | catalogue |
|---|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | |
| 64653 | Curators of the DSMZ | https://www.dsmz.de/collection/catalogue/details/culture/DSM-108255 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 108255) | |
| 110922 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | StrainInfo: A central database for resolving microbial strain identifiers | 10.60712/SI-ID398348.1 |