Strain identifier
BacDive ID: 158076
Type strain: 
Species: Erythrobacter sp.
Strain Designation: sw186
Strain history: <- X.-H. Zhang, Ocean Univ. China, Qingdao, P. R. China; sw186
NCBI tax ID(s): 1042 (species)
version 9 (current version)
General
@ref: 64650
BacDive-ID: 158076
DSM-Number: 25886
keywords: 16S sequence, Bacteria
description: Erythrobacter sp. sw186 is a bacterium that was isolated from seawater.
NCBI tax id
- NCBI tax id: 1042
- Matching level: species
strain history
- @ref: 64650
- history: <- X.-H. Zhang, Ocean Univ. China, Qingdao, P. R. China; sw186
doi: 10.13145/bacdive158076.20240510.9
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/pseudomonadota
- domain: Bacteria
- phylum: Pseudomonadota
- class: Alphaproteobacteria
- order: Sphingomonadales
- family: Erythrobacteraceae
- genus: Erythrobacter
- species: Erythrobacter sp.
- full scientific name: Erythrobacter Shiba and Simidu 1982
synonyms
@ref synonym 20215 Erythromicrobium 20215 Porphyrobacter
@ref: 64650
domain: Bacteria
phylum: Proteobacteria
class: Alphaproteobacteria
order: Sphingomonadales
family: Erythrobacteraceae
genus: Erythrobacter
species: Erythrobacter sp.
full scientific name: Erythrobacter sp.
strain designation: sw186
type strain: no
Culture and growth conditions
culture medium
- @ref: 64650
- name: BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514)
- growth: yes
- link: https://mediadive.dsmz.de/medium/514
- composition: Name: BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514) Composition: NaCl 19.45 g/l MgCl2 5.9 g/l Bacto peptone 5.0 g/l Na2SO4 3.24 g/l CaCl2 1.8 g/l Yeast extract 1.0 g/l KCl 0.55 g/l NaHCO3 0.16 g/l Fe(III) citrate 0.1 g/l KBr 0.08 g/l SrCl2 0.034 g/l H3BO3 0.022 g/l Na2HPO4 0.008 g/l Na-silicate 0.004 g/l NaF 0.0024 g/l (NH4)NO3 0.0016 g/l Distilled water
culture temp
- @ref: 64650
- growth: positive
- type: growth
- temperature: 28
Isolation, sampling and environmental information
isolation
- @ref: 64650
- sample type: seawater
- country: Southwest Pacific Ocean
- latitude: -41.85
- longitude: -153.1
isolation source categories
- Cat1: #Environmental
- Cat2: #Aquatic
- Cat3: #Marine
taxonmaps
- @ref: 69479
- File name: preview.99_39619.png
- url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_20;96_1871;97_22981;98_28971;99_39619&stattab=map
- Last taxonomy: Aurantiacibacter zhengii
- 16S sequence: JQ082163
- Sequence Identity:
- Total samples: 64
- soil counts: 7
- aquatic counts: 48
- animal counts: 8
- plant counts: 1
Sequence information
16S sequences
- @ref: 64650
- description: Erythrobacter sp. U1370-101126-SW186 16S ribosomal RNA gene, partial sequence
- accession: JQ082163
- length: 1394
- database: nuccore
- NCBI tax ID: 1171537
External links
@ref: 64650
culture collection no.: DSM 25886
straininfo link
- @ref: 110919
- straininfo: 405435
Reference
| @id | authors | title | doi/url | catalogue |
|---|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | |
| 64650 | Curators of the DSMZ | https://www.dsmz.de/collection/catalogue/details/culture/DSM-25886 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 25886) | |
| 69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich. | MicrobeAtlas 1.0 beta | https://microbeatlas.org/ | |
| 110919 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | StrainInfo: A central database for resolving microbial strain identifiers | 10.60712/SI-ID405435.1 |