Strain identifier
BacDive ID: 157987
Type strain: 
Species: Acidovorax sp.
Strain Designation: 3H11
Strain history: <- A. M. Deutschbauer, Lawrence Berkeley National Laboratory (LBNL), Berkeley, USA; GW101-3H11 <- R. Chakraborty, LBNL
NCBI tax ID(s): 1872122 (species)
version 9 (current version)
General
@ref: 64560
BacDive-ID: 157987
DSM-Number: 106133
keywords: Bacteria
description: Acidovorax sp. 3H11 is a bacterium that was isolated from ground water.
NCBI tax id
- NCBI tax id: 1872122
- Matching level: species
strain history
- @ref: 64560
- history: <- A. M. Deutschbauer, Lawrence Berkeley National Laboratory (LBNL), Berkeley, USA; GW101-3H11 <- R. Chakraborty, LBNL
doi: 10.13145/bacdive157987.20240510.9
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/pseudomonadota
- domain: Bacteria
- phylum: Pseudomonadota
- class: Betaproteobacteria
- order: Burkholderiales
- family: Comamonadaceae
- genus: Acidovorax
- species: Acidovorax sp.
- full scientific name: Acidovorax Willems et al. 1990
synonyms
@ref synonym 20215 Paenacidovorax 20215 Paracidovorax
@ref: 64560
domain: Bacteria
phylum: Proteobacteria
class: Betaproteobacteria
order: Burkholderiales
family: Comamonadaceae
genus: Acidovorax
species: Acidovorax sp.
full scientific name: Acidovorax sp.
strain designation: 3H11
type strain: no
Morphology
multimedia
- @ref: 64560
- multimedia content: https://www.dsmz.de/microorganisms/photos/DSM_106133.jpg
- caption: DSM 106133 on medium 830 at 28 °C
- intellectual property rights: © Leibniz-Institut DSMZ
Culture and growth conditions
culture medium
- @ref: 64560
- name: R2A MEDIUM (DSMZ Medium 830)
- growth: yes
- link: https://mediadive.dsmz.de/medium/830
- composition: Name: R2A MEDIUM (DSMZ Medium 830) Composition: Agar 15.0 g/l Casamino acids 0.5 g/l Starch 0.5 g/l Glucose 0.5 g/l Proteose peptone 0.5 g/l Yeast extract 0.5 g/l K2HPO4 0.3 g/l Na-pyruvate 0.3 g/l MgSO4 x 7 H2O 0.05 g/l Distilled water
culture temp
- @ref: 64560
- growth: positive
- type: growth
- temperature: 28
Physiology and metabolism
metabolite utilization
| @ref | Chebi-ID | metabolite | utilization activity | kind of utilization tested |
|---|---|---|---|---|
| 68369 | 25115 | malate | + | assimilation |
| 68369 | 17128 | adipate | - | assimilation |
| 68369 | 27689 | decanoate | - | assimilation |
| 68369 | 24265 | gluconate | + | assimilation |
| 68369 | 17306 | maltose | - | assimilation |
| 68369 | 59640 | N-acetylglucosamine | - | assimilation |
| 68369 | 16899 | D-mannitol | + | assimilation |
| 68369 | 16024 | D-mannose | + | assimilation |
| 68369 | 30849 | L-arabinose | + | assimilation |
| 68369 | 17634 | D-glucose | + | assimilation |
| 68369 | 5291 | gelatin | - | hydrolysis |
| 68369 | 4853 | esculin | - | hydrolysis |
| 68369 | 16199 | urea | + | hydrolysis |
| 68369 | 29016 | arginine | - | hydrolysis |
| 68369 | 17634 | D-glucose | - | fermentation |
| 68369 | 27897 | tryptophan | - | energy source |
| 68369 | 17632 | nitrate | + | reduction |
metabolite production
- @ref: 68369
- Chebi-ID: 35581
- metabolite: indole
- production: no
metabolite tests
- @ref: 68369
- Chebi-ID: 35581
- metabolite: indole
- indole test: -
enzymes
| @ref | value | activity | ec |
|---|---|---|---|
| 68369 | cytochrome oxidase | + | 1.9.3.1 |
| 68369 | gelatinase | - | |
| 68369 | beta-glucosidase | - | 3.2.1.21 |
| 68369 | urease | + | 3.5.1.5 |
| 68369 | arginine dihydrolase | - | 3.5.3.6 |
API 20NE
| @ref | NO3 | TRP | GLU_ Ferm | ADH Arg | URE | ESC | GEL | PNPG | GLU_ Assim | ARA | MNE | MAN | NAG | MAL | GNT | CAP | ADI | MLT | CIT | PAC | OX |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 64560 | + | - | - | - | + | - | - | - | + | + | + | + | - | - | + | - | - | + | - | - | + |
Isolation, sampling and environmental information
isolation
- @ref: 64560
- sample type: ground water
- geographic location: Oak Ridge, Tennessee (35° 58' 38.4'' N, 84° 16' 26.7'' W)
- country: USA
- origin.country: USA
- continent: North America
- latitude: 35.9773
- longitude: -84.2741
isolation source categories
- Cat1: #Environmental
- Cat2: #Aquatic
- Cat3: #Groundwater
External links
@ref: 64560
culture collection no.: DSM 106133
straininfo link
- @ref: 110835
- straininfo: 401610
Reference
| @id | authors | title | doi/url | catalogue |
|---|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | |
| 64560 | Curators of the DSMZ | https://www.dsmz.de/collection/catalogue/details/culture/DSM-106133 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 106133) | |
| 68369 | Automatically annotated from API 20NE | |||
| 110835 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | StrainInfo: A central database for resolving microbial strain identifiers | 10.60712/SI-ID401610.1 |