Strain identifier
BacDive ID: 157870
Type strain: 
Species: Staphylococcus capitis
Strain Designation: H36
Strain history: <- D. Lymperopoulou, Univ. of California, Berkeley, USA; H36
NCBI tax ID(s): 29388 (species)
General
@ref: 64443
BacDive-ID: 157870
DSM-Number: 103511
keywords: genome sequence, Bacteria, mesophilic, human pathogen
description: Staphylococcus capitis H36 is a mesophilic human pathogen that was isolated from Indoor air, residential bathroom.
NCBI tax id
- NCBI tax id: 29388
- Matching level: species
strain history
- @ref: 64443
- history: <- D. Lymperopoulou, Univ. of California, Berkeley, USA; H36
doi: 10.13145/bacdive157870.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/bacillota
- domain: Bacteria
- phylum: Bacillota
- class: Bacilli
- order: Caryophanales
- family: Staphylococcaceae
- genus: Staphylococcus
- species: Staphylococcus capitis
- full scientific name: Staphylococcus capitis Kloos and Schleifer 1975 (Approved Lists 1980)
@ref: 64443
domain: Bacteria
phylum: Firmicutes
class: Bacilli
order: Bacillales
family: Staphylococcaceae
genus: Staphylococcus
species: Staphylococcus capitis
full scientific name: Staphylococcus capitis Kloos and Schleifer 1975
strain designation: H36
type strain: no
Culture and growth conditions
culture medium
- @ref: 64443
- name: TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92)
- growth: yes
- link: https://mediadive.dsmz.de/medium/92
- composition: Name: TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92) Composition: Trypticase soy broth 30.0 g/l Agar 15.0 g/l Yeast extract 3.0 g/l Distilled water
culture temp
- @ref: 64443
- growth: positive
- type: growth
- temperature: 37
- range: mesophilic
Isolation, sampling and environmental information
isolation
- @ref: 64443
- sample type: Indoor air, residential bathroom
- geographic location: CA, Oakland
- country: USA
- origin.country: USA
- continent: North America
isolation source categories
| Cat1 | Cat2 | Cat3 |
|---|---|---|
| #Engineered | #Built environment | #House |
| #Engineered | #Built environment | #Indoor |
| #Environmental | #Air | #Indoor Air |
Safety information
risk assessment
- @ref: 64443
- pathogenicity human: yes, in single cases
- biosafety level: 1
- biosafety level comment: Risk group (German classification)
Sequence information
Genome sequences
| @ref | description | accession | assembly level | database | NCBI tax ID |
|---|---|---|---|---|---|
| 66792 | Staphylococcus capitis H36 | 2675903235 | draft | img | 29388 |
| 66792 | Staphylococcus capitis H36 | GCA_001650475 | contig | ncbi | 29388 |
External links
@ref: 64443
culture collection no.: DSM 103511
straininfo link
- @ref: 110725
- straininfo: 404359
Reference
| @id | authors | title | doi/url | catalogue |
|---|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | |
| 64443 | Curators of the DSMZ | https://www.dsmz.de/collection/catalogue/details/culture/DSM-103511 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 103511) | |
| 66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | https://diaspora-project.de/progress.html#genomes | |
| 110725 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | StrainInfo: A central database for resolving microbial strain identifiers | 10.60712/SI-ID404359.1 |