Strain identifier

BacDive ID: 15737

Type strain: No

Species: Streptomyces sp.

Strain Designation: AE-415

Strain history: KCC S-0118 <-- IFO 3125 <-- Ogata 2222.

NCBI tax ID(s): 1931 (species)

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General

@ref: 9804

BacDive-ID: 15737

DSM-Number: 40798

keywords: 16S sequence, Bacteria, mesophilic, antibiotic compound production

description: Streptomyces sp. AE-415 is a mesophilic bacterium that builds an aerial mycelium and produces antibiotic compounds.

NCBI tax id

  • NCBI tax id: 1931
  • Matching level: species

strain history

@refhistory
9804<- H.D. Tresner, AE-415 (Streptomyces acidomyceticus)
67770KCC S-0118 <-- IFO 3125 <-- Ogata 2222.

doi: 10.13145/bacdive15737.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/actinomycetota
  • domain: Bacteria
  • phylum: Actinomycetota
  • class: Actinomycetes
  • order: Kitasatosporales
  • family: Streptomycetaceae
  • genus: Streptomyces
  • species: Streptomyces sp.
  • full scientific name: Streptomyces Waksman and Henrici 1943 (Approved Lists 1980)

  • synonyms

    @refsynonym
    20215Microechinospora
    20215Carbonactinospora
    20215Actinosporangium
    20215Actinopycnidium
    20215Elytrosporangium
    20215Streptoverticillium
    20215Chainia
    20215Indiella
    20215Actinacidiphila
    20215Kitasatoa
    20215Microellobosporia

@ref: 9804

domain: Bacteria

phylum: Actinobacteria

class: Actinobacteria

order: Actinomycetales

family: Streptomycetaceae

genus: Streptomyces

species: Streptomyces sp.

full scientific name: Streptomyces sp.

strain designation: AE-415

type strain: no

Morphology

colony morphology

@refcolony colormedium used
69217Blue green (6004), brown beige (1011), olive brown (8008)ISP 7
69217Black brown (8022), chocolate brown (8017), olive grey (7002)suter with tyrosine
69217Ivory (1014), olive yellow (1020)suter without tyrosine
69217Khaki grey (7008)ISP 6
69217Mahogany brown (8016), black green (6012), sand yellow (1002)ISP 3
69217Olive drab (6022)ISP 4
69217Sand yellow (1002), olive yellow (1020)ISP 2
69217Sand yellow (1002), olive yellow (1020)ISP 5

multicellular morphology

@refforms multicellular complexcomplex namemedium namecomplex color
69217noAerial myceliumISP 6
69217yesAerial myceliumISP 5Cream (9001), telegrey 2 (7046), pure white (9010)
69217yesAerial myceliumISP 4Traffic white (9016), squirrel grey (7000), silver grey (7001)
69217yesAerial myceliumISP 3Beige red (3012), silver grey (7001), signal white (9003)
69217yesAerial myceliumISP 2Grey white (9002)
69217yesAerial myceliumISP 7Signal white (9003), telegrey 2 (7046)
69217noAerial myceliumsuter with tyrosine
69217yesAerial myceliumsuter without tyrosinePapyrus white (9018)

pigmentation

@refproductionnamecolor
69217yesMelanin
69217yessoluble pigmentOlive brown (8008)

multimedia

@refmultimedia contentcaptionintellectual property rights
69217DSM_40798_image3.jpegPlates (65, ISP2, ISP3, ISP4, ISP5, ISP7)Helmholtz-Zentrum für Infektionsforschung GmbH
69217DSM_40798_image4.jpegPlates (65, ISP2, ISP3, ISP4, ISP5, ISP7)Helmholtz-Zentrum für Infektionsforschung GmbH

Culture and growth conditions

culture medium

@refnamegrowthlinkcomposition
9804GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)yeshttps://mediadive.dsmz.de/medium/65Name: GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) Composition: Agar 18.0 g/l Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l CaCO3 2.0 g/l Distilled water
9804ROLLED OATS MINERAL MEDIUM (DSMZ Medium 84)yeshttps://www.dsmz.de/microorganisms/medium/pdf/DSMZ_Medium84.pdf

culture temp

@refgrowthtypetemperaturerange
9804positivegrowth28mesophilic
67770positivegrowth28mesophilic

Physiology and metabolism

compound production

@refcompound
9804acidomycin
9804actithiazic acid

halophily

  • @ref: 69217
  • salt: NaCl
  • growth: positive
  • tested relation: growth
  • concentration: 0 %

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
6921722599arabinose+growth
6921762968cellulose-growth
6921728757fructose+growth
6921717234glucose+growth
6921717268inositol-growth
6921737684mannose-growth
6921716634raffinose-growth
6921726546rhamnose-growth
6921717992sucrose+growth
6921718222xylose+/-growth
6837917632nitrate+reduction
683794853esculin+hydrolysis
6837916199urea-hydrolysis
683795291gelatin+hydrolysis
6837917634D-glucose-fermentation
6837916988D-ribose-fermentation
6837965327D-xylose-fermentation
6837916899D-mannitol-fermentation
6837917306maltose-fermentation
6837917716lactose-fermentation
6837917992sucrose-fermentation
6837928087glycogen-fermentation

metabolite production

  • @ref: 67770
  • metabolite: mycobacidin
  • production: yes

enzymes

@refvalueactivityec
68379gelatinase+
68379urease-3.5.1.5
68379beta-glucosidase+3.2.1.21
68379N-acetyl-beta-glucosaminidase-3.2.1.52
68379alpha-glucosidase-3.2.1.20
68379beta-galactosidase-3.2.1.23
68379beta-glucuronidase-3.2.1.31
68379alkaline phosphatase+3.1.3.1
68379pyrrolidonyl arylamidase-3.4.19.3
68379pyrazinamidase-3.5.1.B15
68382alkaline phosphatase+3.1.3.1
68382esterase (C 4)+
68382esterase lipase (C 8)+
68382leucine arylamidase+3.4.11.1
68382valine arylamidase+
68382alpha-chymotrypsin+3.4.21.1
68382acid phosphatase+3.1.3.2
68382naphthol-AS-BI-phosphohydrolase+
68382alpha-galactosidase-3.2.1.22
68382beta-galactosidase-3.2.1.23
68382beta-glucuronidase-3.2.1.31
68382beta-glucosidase+3.2.1.21
68382N-acetyl-beta-glucosaminidase+3.2.1.52
68382alpha-mannosidase+3.2.1.24
68382alpha-fucosidase-3.2.1.51

API coryne

@refNITPYZPYRAPALbeta GURbeta GALalpha GLUbeta NAGESCUREGELGLURIBXYLMANMALLACSACGLYG
69217+--+----+-+--------

API zym

@refAlkaline phosphataseEsteraseEsterase LipaseLipaseLeucine arylamidaseValine arylamidaseCystine arylamidaseTrypsinalpha- ChymotrypsinAcid phosphataseNaphthol-AS-BI-phosphohydrolasealpha- Galactosidasebeta- Galactosidasebeta- Glucuronidasealpha- Glucosidasebeta- GlucosidaseN-acetyl-beta- glucosaminidasealpha- Mannosidasealpha- Fucosidase
69217++++/-+++/-+/-+++---+/-+++-

Isolation, sampling and environmental information

isolation

  • @ref: 67770
  • sample type: Soil

Sequence information

16S sequences

@refdescriptionaccessionlengthdatabaseNCBI tax ID
20218Streptomyces lavendulae subsp. lavendulae gene for 16S rRNA, partial sequence, strain: NBRC 3125AB1847311479ena58340
20218Streptomyces lavendulae DNA for 16S rRNA, strain IFO 3125D851061514ena1914

External links

@ref: 9804

culture collection no.: DSM 40798, ATCC 11611, ETH 16699, IFO 3125, KCC S-0118, NBRC 3125, RIA 631, JCM 4118, BCRC 10307, VKM Ac-597

straininfo link

  • @ref: 84823
  • straininfo: 35392

Reference

@idauthorscataloguedoi/urltitlejournalpubmed
9804Curators of the DSMZLeibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 40798)https://www.dsmz.de/collection/catalogue/details/culture/DSM-40798
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.10.1099/ijsem.0.004332List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ
20218Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.10.1016/j.syapm.2013.11.002StrainInfo introduces electronic passports for microorganisms.Syst Appl Microbiol. 37: 42-50 201424321274
67770Curators of the JCMhttps://jcm.brc.riken.jp/en/
68379Automatically annotated from API Coryne
68382Automatically annotated from API zym
69217Wink, J.https://cdn.dsmz.de/wink/DSM%2040798.pdfCompendium of Actinobacteria. HZI-Helmholtz-Centre for Infection Research, Braunschweig
84823Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.10.60712/SI-ID35392.1StrainInfo: A central database for resolving microbial strain identifiers