Strain identifier

BacDive ID: 157035

Type strain: No

Species: unclassified bacterium

Strain Designation: S15

Strain history: <- P. François; University hospital of Geneva, GENEVA, SWITZERLAND; <- van der MEE-MARQUET N; S15

NCBI tax ID(s): 1869227 (species)

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General

@ref: 64329

BacDive-ID: 157035

DSM-Number: 105791

keywords: 16S sequence, thermophilic

description: unclassified bacterium S15 is a thermophilic prokaryote that was isolated from Human blood.

NCBI tax id

  • NCBI tax id: 1869227
  • Matching level: species

strain history

  • @ref: 64329
  • history: <- P. François; University hospital of Geneva, GENEVA, SWITZERLAND; <- van der MEE-MARQUET N; S15

doi: 10.13145/bacdive157035.20230509.8.1

Name and taxonomic classification

@ref: 64329

phylum: Not assigned to order

class: Not assigned to order

order: Clostridiales

family: Not assigned to family

genus: unclassified

species: unclassified bacterium

full scientific name: unclassified bacterium

strain designation: S15

type strain: no

Culture and growth conditions

culture medium

  • @ref: 64329
  • name: COLUMBIA BLOOD MEDIUM (DSMZ Medium 693)
  • growth: yes
  • link: https://mediadive.dsmz.de/medium/693
  • composition: Name: COLUMBIA BLOOD MEDIUM (DSMZ Medium 693) Composition: Defibrinated sheep blood 50.0 g/l Columbia agar base

culture temp

  • @ref: 64329
  • growth: positive
  • type: growth
  • temperature: 40
  • range: thermophilic

Physiology and metabolism

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
6837316199urea-hydrolysis
6837317632nitrate+reduction
68373606565hippurate-hydrolysis
6837317634D-glucose-assimilation
6837330031succinate-assimilation
6837330089acetate-assimilation
6837317272propionate-assimilation
6837325115malate-assimilation
6837316947citrate-assimilation

antibiotic resistance

@refChEBImetaboliteis antibioticis sensitivesensitivity conc.
6837348923erythromycinyesyes14 µg
68373474053cefazolinyesyes224 µg
68373100147nalidixic acidyesyes84 µg

metabolite production

  • @ref: 68373
  • Chebi-ID: 16136
  • metabolite: hydrogen sulfide
  • production: no

enzymes

@refvalueactivityec
68373catalase+1.11.1.6
68373alkaline phosphatase+3.1.3.1
68373L-aspartate arylamidase-3.4.11.21
68373L-arginine arylamidase-
68373pyrrolidonyl arylamidase-3.4.19.3
68373esterase+
68373urease-3.5.1.5

API CAM

@refURENITESTHIPGGTTTCPYRAArgAAspAPALH2SGLUSUTNALCFZACEPROPMLTCITEROCAT
64329-++-+/-+/----+----------+

Isolation, sampling and environmental information

isolation

@refsample typesampling dategeographic locationcountryorigin.countrycontinent
63532Human blood2015-08-23ToursFranceFRAEurope
64329BloodToursFranceFRAEurope

isolation source categories

Cat1Cat2Cat3
#Host#Human
#Host Body Product#Fluids#Blood

Sequence information

16S sequences

  • @ref: 64329
  • description: Helicobacter sp. TUL 16S ribosomal RNA gene, partial sequence
  • accession: KX057485
  • length: 1496
  • database: ena
  • NCBI tax ID: 1848928

GC content

  • @ref: 64329
  • GC-content: 37.8
  • method: sequence analysis

External links

@ref: 64329

culture collection no.: CCUG 68986, DSM 105791, CIP 111406

Reference

@idauthorscataloguedoi/urltitle
63532Curators of the CCUGCulture Collection University of Gothenburg (CCUG) (CCUG 68986)https://www.ccug.se/strain?id=68986
64329Curators of the DSMZLeibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 105791)https://www.dsmz.de/collection/catalogue/details/culture/DSM-105791
68373Automatically annotated from API CAM