Archive BacDiveID:10.13145/bacdive15699.20230509.8.1

Strain identifier

BacDive ID: 15699

Type strain:

Species: Streptomyces sp.

Strain history: KCC S-0713 <-- IFO 13442 <-- SAJ <-- ISP 5540 <-- IMRU 3049.

NCBI tax ID(s): 1931 (species)

For citation purpose refer to the digital object identifier (doi) of the current version.

General

@ref: 9628

BacDive-ID: 15699

DSM-Number: 40540

keywords: 16S sequence, Bacteria, mesophilic

description: Streptomyces sp. DSM 40540 is a mesophilic bacterium of the family Streptomycetaceae.

NCBI tax id

NCBI tax id: 1931
Matching level: species

strain history

@ref	history
9628	<- E.B. Shirling, ISP (Streptomyces acidoresistans) <- IMRU
67770	KCC S-0713 <-- IFO 13442 <-- SAJ <-- ISP 5540 <-- IMRU 3049.

doi: 10.13145/bacdive15699.20230509.8.1

Name and taxonomic classification

LPSN

@ref: 20215
description: domain/bacteria
keyword: phylum/actinomycetota
domain: Bacteria
phylum: Actinomycetota
class: Actinomycetes
order: Kitasatosporales
family: Streptomycetaceae
genus: Streptomyces
species: Streptomyces sp.
full scientific name: Streptomyces Waksman and Henrici 1943 (Approved Lists 1980)

synonyms

@ref	synonym
20215	Microechinospora
20215	Carbonactinospora
20215	Actinosporangium
20215	Actinopycnidium
20215	Elytrosporangium
20215	Streptoverticillium
20215	Chainia
20215	Indiella
20215	Actinacidiphila
20215	Kitasatoa
20215	Microellobosporia

@ref: 9628

domain: Bacteria

phylum: Actinobacteria

class: Actinobacteria

order: Actinomycetales

family: Streptomycetaceae

genus: Streptomyces

species: Streptomyces sp.

full scientific name: Streptomyces sp.

type strain: no

Culture and growth conditions

culture medium

@ref: 9628
name: GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)
growth: yes
link: https://mediadive.dsmz.de/medium/65
composition: Name: GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) Composition: Agar 18.0 g/l Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l CaCO3 2.0 g/l Distilled water

culture temp

@ref	growth	type	temperature	range
9628	positive	growth	37	mesophilic
67770	positive	growth	28	mesophilic

Isolation, sampling and environmental information

taxonmaps

@ref: 69479
File name: preview.99_135.png
url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_15;96_102;97_109;98_120;99_135&stattab=map
Last taxonomy: Streptomyces
16S sequence: AB184406
Sequence Identity:
Total samples: 4030
soil counts: 2441
aquatic counts: 286
animal counts: 1009
plant counts: 294

Sequence information

16S sequences

@ref: 20218
description: Streptomyces acidoresistans gene for 16S rRNA, partial sequence, strain: NBRC 13442
accession: AB184406
length: 1476
database: ena
NCBI tax ID: 285456

External links

@ref: 9628

culture collection no.: DSM 40540, ATCC 27413, CBS 743.72, IFO 13442, IMRU 3049, ISP 5540, NBRC 13442, RIA 1403, JCM 4713, KCTC 9678, VKM Ac-1259

straininfo link

@ref: 84785
straininfo: 265491

Reference

@id	authors	catalogue	doi/url	title	journal	pubmed
9628	Curators of the DSMZ	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 40540)	https://www.dsmz.de/collection/catalogue/details/culture/DSM-40540
20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.		10.1099/ijsem.0.004332	List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ
20218	Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.		10.1016/j.syapm.2013.11.002	StrainInfo introduces electronic passports for microorganisms.	Syst Appl Microbiol. 37: 42-50 2014	24321274
67770	Curators of the JCM		https://jcm.brc.riken.jp/en/
69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.		https://microbeatlas.org/	MicrobeAtlas 1.0 beta
84785	Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.		10.60712/SI-ID265491.1	StrainInfo: A central database for resolving microbial strain identifiers