Strain identifier

BacDive ID: 156405

Type strain: No

Species: Bergeyella zoohelcum

NCBI tax ID(s): 1015 (species)

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General

@ref: 62664

BacDive-ID: 156405

keywords: Bacteria, aerobe

description: Bergeyella zoohelcum CCUG 61592 is an aerobe bacterium that was isolated from Human wound,cat bite.

NCBI tax id

  • NCBI tax id: 1015
  • Matching level: species

doi: 10.13145/bacdive156405.20240510.9

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/bacteroidota
  • domain: Bacteria
  • phylum: Bacteroidota
  • class: Flavobacteriia
  • order: Flavobacteriales
  • family: Weeksellaceae
  • genus: Bergeyella
  • species: Bergeyella zoohelcum
  • full scientific name: Bergeyella zoohelcum (Holmes et al. 1987) Vandamme et al. 1994

  • synonyms

    • @ref: 20215
    • synonym: Weeksella zoohelcum

@ref: 62664

domain: Bacteria

phylum: Bacteroidetes

class: Flavobacteriia

order: Flavobacteriales

family: Flavobacteriaceae

genus: Bergeyella

species: Bergeyella zoohelcum

type strain: no

Culture and growth conditions

culture temp

  • @ref: 62664
  • growth: positive
  • type: growth
  • temperature: 37

Physiology and metabolism

oxygen tolerance

  • @ref: 62664
  • oxygen tolerance: aerobe

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
6837717634D-glucose+builds acid from
6837715824D-fructose-builds acid from
6837717306maltose-builds acid from
6837717992sucrose-builds acid from
6837718257ornithine-degradation
6837716199urea+hydrolysis
6837727897tryptophan+energy source

metabolite production

  • @ref: 68377
  • Chebi-ID: 35581
  • metabolite: indole
  • production: yes

metabolite tests

  • @ref: 68377
  • Chebi-ID: 35581
  • metabolite: indole
  • indole test: +

enzymes

@refvalueactivityec
68377tryptophan deaminase+4.1.99.1
68377gamma-glutamyltransferase+2.3.2.2
68377proline-arylamidase-3.4.11.5
68377beta-galactosidase-3.2.1.23
68377alkaline phosphatase+3.1.3.1
68377lipase+
68377urease+3.5.1.5
68377ornithine decarboxylase-4.1.1.17
68377beta-lactamase-3.5.2.6
68382alkaline phosphatase+3.1.3.1
68382esterase (C 4)+
68382esterase lipase (C 8)-
68382lipase (C 14)-
68382leucine arylamidase+3.4.11.1
68382valine arylamidase+
68382cystine arylamidase-3.4.11.3
68382trypsin-3.4.21.4
68382alpha-chymotrypsin-3.4.21.1
68382acid phosphatase+3.1.3.2
68382naphthol-AS-BI-phosphohydrolase+
68382alpha-galactosidase-3.2.1.22
68382beta-galactosidase-3.2.1.23
68382beta-glucuronidase-3.2.1.31
68382alpha-glucosidase-3.2.1.20
68382beta-glucosidase-3.2.1.21
68382N-acetyl-beta-glucosaminidase-3.2.1.52
68382alpha-mannosidase-3.2.1.24
68382alpha-fucosidase-3.2.1.51

API zym

@refControlAlkaline phosphataseEsteraseEsterase LipaseLipaseLeucine arylamidaseValine arylamidaseCystine arylamidaseTrypsinalpha- ChymotrypsinAcid phosphataseNaphthol-AS-BI-phosphohydrolasealpha- Galactosidasebeta- Galactosidasebeta- Glucuronidasealpha- Glucosidasebeta- GlucosidaseN-acetyl-beta- glucosaminidasealpha- Mannosidasealpha- Fucosidase
62664-++--++---++--------

API NH

@refPENGLUFRUMALSACODCURELIPPALbeta GALProAGGTIND
62664-+----+++--++

Isolation, sampling and environmental information

isolation

  • @ref: 62664
  • sample type: Human wound,cat bite
  • sampling date: 2011-08-25
  • geographic location: Kalmar
  • country: Sweden
  • origin.country: SWE
  • continent: Europe

isolation source categories

Cat1Cat2Cat3
#Host#Human
#Host#Mammals#Felidae (Cat)
#Host Body-Site#Other#Wound
#Infection#Patient

External links

@ref: 62664

culture collection no.: CCUG 61592

straininfo link

  • @ref: 109648
  • straininfo: 409593

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
62664Curators of the CCUGhttps://www.ccug.se/strain?id=61592Culture Collection University of Gothenburg (CCUG) (CCUG 61592)
68377Automatically annotated from API NH
68382Automatically annotated from API zym
109648Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID409593.1