Strain identifier

BacDive ID: 156312

Type strain: No

Species: Pseudoalteromonas atlantica

NCBI tax ID(s): 288 (species)

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General

@ref: 62551

BacDive-ID: 156312

keywords: Bacteria, aerobe, mesophilic

description: Pseudoalteromonas atlantica CCUG 61125 is an aerobe, mesophilic bacterium that was isolated from Oyster farm,seawater inlet.

NCBI tax id

  • NCBI tax id: 288
  • Matching level: species

doi: 10.13145/bacdive156312.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/pseudomonadota
  • domain: Bacteria
  • phylum: Pseudomonadota
  • class: Gammaproteobacteria
  • order: Alteromonadales
  • family: Pseudoalteromonadaceae
  • genus: Pseudoalteromonas
  • species: Pseudoalteromonas atlantica
  • full scientific name: Pseudoalteromonas atlantica (Akagawa-Matsushita et al. 1992) Gauthier et al. 1995

  • synonyms

    • @ref: 20215
    • synonym: Alteromonas atlantica

@ref: 62551

domain: Bacteria

phylum: Proteobacteria

class: Gammaproteobacteria

order: Alteromonadales

family: Pseudoalteromonadaceae

genus: Pseudoalteromonas

species: Pseudoalteromonas atlantica

type strain: no

Culture and growth conditions

culture temp

  • @ref: 62551
  • growth: positive
  • type: growth
  • temperature: 30
  • range: mesophilic

Physiology and metabolism

oxygen tolerance

  • @ref: 62551
  • oxygen tolerance: aerobe

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
6836925115malate-assimilation
6836917128adipate-assimilation
6836927689decanoate-assimilation
6836924265gluconate-assimilation
6836917306maltose-assimilation
6836959640N-acetylglucosamine-assimilation
6836916899D-mannitol-assimilation
6836916024D-mannose-assimilation
6836930849L-arabinose-assimilation
6836917634D-glucose-assimilation
683695291gelatin+hydrolysis
683694853esculin+hydrolysis
6836916199urea-hydrolysis
6836929016arginine-hydrolysis
6836917634D-glucose-fermentation
6836927897tryptophan-energy source
6836917632nitrate-reduction

metabolite production

  • @ref: 68369
  • Chebi-ID: 35581
  • metabolite: indole
  • production: no

metabolite tests

  • @ref: 68369
  • Chebi-ID: 35581
  • metabolite: indole
  • indole test: -

enzymes

@refvalueactivityec
68369cytochrome oxidase+1.9.3.1
68369gelatinase+
68369beta-glucosidase+3.2.1.21
68369urease-3.5.1.5
68369arginine dihydrolase-3.5.3.6
68382alkaline phosphatase+3.1.3.1
68382esterase (C 4)-
68382esterase lipase (C 8)+
68382lipase (C 14)-
68382leucine arylamidase+3.4.11.1
68382valine arylamidase-
68382cystine arylamidase-3.4.11.3
68382trypsin-3.4.21.4
68382alpha-chymotrypsin-3.4.21.1
68382acid phosphatase+3.1.3.2
68382naphthol-AS-BI-phosphohydrolase+
68382alpha-galactosidase-3.2.1.22
68382beta-galactosidase-3.2.1.23
68382beta-glucuronidase-3.2.1.31
68382alpha-glucosidase-3.2.1.20
68382beta-glucosidase-3.2.1.21
68382N-acetyl-beta-glucosaminidase-3.2.1.52
68382alpha-mannosidase-3.2.1.24
68382alpha-fucosidase-3.2.1.51

fatty acid profile

  • fatty acids

    @reffatty acidpercentageECL
    62551C12:03.112
    62551C15:01.915
    62551C16:021.816
    62551C17:05.417
    62551C10:0 3OH1.711.423
    62551C14:0 3OH/C16:1 ISO I3.215.485
    62551C16:0 N alcohol1.815.549
    62551C16:1 ω7c31.415.819
    62551C16:1 ω7c alcohol1.715.386
    62551C17:1 ω8c7.216.792
    62551C18:1 ω7c /12t/9t20.817.824
  • type of FA analysis: whole cell analysis
  • method/protocol: CCUG

API zym

@refControlAlkaline phosphataseEsteraseEsterase LipaseLipaseLeucine arylamidaseValine arylamidaseCystine arylamidaseTrypsinalpha- ChymotrypsinAcid phosphataseNaphthol-AS-BI-phosphohydrolasealpha- Galactosidasebeta- Galactosidasebeta- Glucuronidasealpha- Glucosidasebeta- GlucosidaseN-acetyl-beta- glucosaminidasealpha- Mannosidasealpha- Fucosidase
62551-+-+-+----++--------

API 20NE

@refNO3TRPGLU_ FermADH ArgUREESCGELPNPGGLU_ AssimARAMNEMANNAGMALGNTCAPADIMLTCITPACOX
62551-----+++------------+

Isolation, sampling and environmental information

isolation

  • @ref: 62551
  • sample type: Oyster farm,seawater inlet
  • sampling date: 2011-04-01
  • geographic location: Göteborg
  • country: Sweden
  • origin.country: SWE
  • continent: Europe

isolation source categories

Cat1Cat2Cat3
#Engineered#Agriculture
#Engineered#Food production#Aquaculture
#Environmental#Aquatic#Marine

External links

@ref: 62551

culture collection no.: CCUG 61125

straininfo link

  • @ref: 109576
  • straininfo: 411602

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
62551Curators of the CCUGhttps://www.ccug.se/strain?id=61125Culture Collection University of Gothenburg (CCUG) (CCUG 61125)
68369Automatically annotated from API 20NE
68382Automatically annotated from API zym
109576Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID411602.1