Strain identifier

BacDive ID: 155882

Type strain: No

Species: Mycobacterium abscessus

NCBI tax ID(s): 36809 (species)

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General

@ref: 62007

BacDive-ID: 155882

keywords: Bacteria, microaerophile, mesophilic

description: Mycobacterium abscessus CCUG 59529 is a microaerophile, mesophilic bacterium that was isolated from Human blood,80-yr-old man.

NCBI tax id

  • NCBI tax id: 36809
  • Matching level: species

doi: 10.13145/bacdive155882.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/actinomycetota
  • domain: Bacteria
  • phylum: Actinomycetota
  • class: Actinomycetes
  • order: Mycobacteriales
  • family: Mycobacteriaceae
  • genus: Mycobacterium
  • species: Mycobacterium abscessus
  • full scientific name: Mycobacterium abscessus (Moore and Frerichs 1953) Kusunoki and Ezaki 1992

  • synonyms

    @refsynonym
    20215Mycobacterium chelonae subsp. abscessus
    20215Mycobacterium chelonei subsp. abscessus
    20215Mycobacterium abscessus
    20215Mycobacteroides abscessus

@ref: 62007

domain: Bacteria

phylum: Actinobacteria

class: Actinobacteria

order: Mycobacteriales

family: Mycobacteriaceae

genus: Mycobacterium

species: Mycobacterium abscessus

type strain: no

Culture and growth conditions

culture temp

  • @ref: 62007
  • growth: positive
  • type: growth
  • temperature: 37
  • range: mesophilic

Physiology and metabolism

oxygen tolerance

  • @ref: 62007
  • oxygen tolerance: microaerophile

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
6837917632nitrate-reduction
683794853esculin+hydrolysis
6837916199urea-hydrolysis
683795291gelatin-hydrolysis
6837917634D-glucose-fermentation
6837916988D-ribose-fermentation
6837965327D-xylose-fermentation
6837916899D-mannitol-fermentation
6837917306maltose-fermentation
6837917716lactose-fermentation
6837917992sucrose-fermentation
6837928087glycogen-fermentation

enzymes

@refvalueactivityec
68379catalase+1.11.1.6
68379gelatinase-
68379urease-3.5.1.5
68379beta-glucosidase+3.2.1.21
68379N-acetyl-beta-glucosaminidase-3.2.1.52
68379alpha-glucosidase+3.2.1.20
68379beta-galactosidase-3.2.1.23
68379beta-glucuronidase-3.2.1.31
68379alkaline phosphatase-3.1.3.1
68379pyrrolidonyl arylamidase-3.4.19.3
68379pyrazinamidase-3.5.1.B15
68382alkaline phosphatase-3.1.3.1
68382esterase (C 4)-
68382esterase lipase (C 8)+
68382lipase (C 14)-
68382leucine arylamidase+3.4.11.1
68382valine arylamidase-
68382cystine arylamidase-3.4.11.3
68382trypsin-3.4.21.4
68382alpha-chymotrypsin-3.4.21.1
68382acid phosphatase-3.1.3.2
68382naphthol-AS-BI-phosphohydrolase+
68382alpha-galactosidase-3.2.1.22
68382beta-galactosidase-3.2.1.23
68382beta-glucuronidase-3.2.1.31
68382alpha-glucosidase+3.2.1.20
68382beta-glucosidase+3.2.1.21
68382N-acetyl-beta-glucosaminidase-3.2.1.52
68382alpha-mannosidase-3.2.1.24
68382alpha-fucosidase-3.2.1.51

fatty acid profile

  • fatty acids

    @reffatty acidpercentageECL
    62007C14:08.714
    62007C16:038.616
    62007C18:01.718
    62007C16:1 ω7c2.615.819
    62007C16:1 ω7c/C15:0 ISO 2OH5.615.85
    62007C18:1 ω9c2217.769
    62007C18:2 ω6,9c/C18:0 ANTE10.417.724
    62007TBSA 10Me18:0718.392
    62007Unidentified3.516.297
  • type of FA analysis: whole cell analysis
  • method/protocol: CCUG

API coryne

@refNITPYZPYRAPALbeta GURbeta GALalpha GLUbeta NAGESCUREGELControlGLURIBXYLMANMALLACSACGLYGCAT
62007------+-+-----------+

API zym

@refControlAlkaline phosphataseEsteraseEsterase LipaseLipaseLeucine arylamidaseValine arylamidaseCystine arylamidaseTrypsinalpha- ChymotrypsinAcid phosphataseNaphthol-AS-BI-phosphohydrolasealpha- Galactosidasebeta- Galactosidasebeta- Glucuronidasealpha- Glucosidasebeta- GlucosidaseN-acetyl-beta- glucosaminidasealpha- Mannosidasealpha- Fucosidase
62007---+-+-----+---++---

Isolation, sampling and environmental information

isolation

  • @ref: 62007
  • sample type: Human blood,80-yr-old man
  • sampling date: 2010-03-01
  • geographic location: Linköping
  • country: Sweden
  • origin.country: SWE
  • continent: Europe

isolation source categories

Cat1Cat2Cat3
#Host#Human#Male
#Host Body Product#Fluids#Blood
#Infection#Patient

External links

@ref: 62007

culture collection no.: CCUG 59529

straininfo link

  • @ref: 109247
  • straininfo: 411420

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
62007Curators of the CCUGhttps://www.ccug.se/strain?id=59529Culture Collection University of Gothenburg (CCUG) (CCUG 59529)
68379Automatically annotated from API Coryne
68382Automatically annotated from API zym
109247Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID411420.1