Strain identifier
BacDive ID: 15588
Type strain: 
Species: Streptomyces scabiei
Strain Designation: RL-42
Strain history: <- D. H. Lambert, RL-42 <- R. Loria
NCBI tax ID(s): 1930 (species)
General
@ref: 10436
BacDive-ID: 15588
DSM-Number: 41660
keywords: 16S sequence, Bacteria, mesophilic, plant pathogen
description: Streptomyces scabiei RL-42 is a mesophilic plant pathogen that was isolated from potato scab.
NCBI tax id
- NCBI tax id: 1930
- Matching level: species
strain history
- @ref: 10436
- history: <- D. H. Lambert, RL-42 <- R. Loria
doi: 10.13145/bacdive15588.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/actinomycetota
- domain: Bacteria
- phylum: Actinomycetota
- class: Actinomycetes
- order: Kitasatosporales
- family: Streptomycetaceae
- genus: Streptomyces
- species: Streptomyces scabiei
- full scientific name: Streptomyces scabiei corrig. (ex Thaxter 1891) Lambert and Loria 1989
synonyms
- @ref: 20215
- synonym: Streptomyces scabies
@ref: 10436
domain: Bacteria
phylum: Actinobacteria
class: Actinobacteria
order: Actinomycetales
family: Streptomycetaceae
genus: Streptomyces
species: Streptomyces scabiei
full scientific name: Streptomyces scabiei (ex Thaxter 1891) Lambert and Loria 1989
strain designation: RL-42
type strain: no
Culture and growth conditions
culture medium
- @ref: 10436
- name: GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)
- growth: yes
- link: https://mediadive.dsmz.de/medium/65
- composition: Name: GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) Composition: Agar 18.0 g/l Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l CaCO3 2.0 g/l Distilled water
culture temp
- @ref: 10436
- growth: positive
- type: growth
- temperature: 28
- range: mesophilic
Isolation, sampling and environmental information
isolation
- @ref: 10436
- sample type: potato scab
- geographic location: Maine
- country: USA
- origin.country: USA
- continent: North America
isolation source categories
| Cat1 | Cat2 | Cat3 |
|---|---|---|
| #Host | #Plants | #Herbaceous plants (Grass,Crops) |
| #Host Body-Site | #Other | #Wound |
| #Host Body-Site | #Plant | #Root (Rhizome) |
Safety information
risk assessment
- @ref: 10436
- pathogenicity plant: yes
- biosafety level: 1
- biosafety level comment: Risk group (German classification)
Sequence information
16S sequences
- @ref: 20218
- description: Streptomyces scabiei strain DSM 41660 clone ITS 16S-23S ribosomal RNA intergenic spacer, partial sequence
- accession: AY297019
- length: 274
- database: ena
- NCBI tax ID: 1930
External links
@ref: 10436
culture collection no.: DSM 41660
straininfo link
- @ref: 84675
- straininfo: 50038
Reference
| @id | authors | catalogue | doi/url | title | journal | pubmed |
|---|---|---|---|---|---|---|
| 10436 | Curators of the DSMZ | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 41660) | https://www.dsmz.de/collection/catalogue/details/culture/DSM-41660 | |||
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | 10.1099/ijsem.0.004332 | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | |||
| 20218 | Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P. | 10.1016/j.syapm.2013.11.002 | StrainInfo introduces electronic passports for microorganisms. | Syst Appl Microbiol. 37: 42-50 2014 | 24321274 | |
| 84675 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | 10.60712/SI-ID50038.1 | StrainInfo: A central database for resolving microbial strain identifiers |