Strain identifier
version 9.1 (current version)
General
@ref: 61998
BacDive-ID: 155874
keywords: genome sequence, Bacteria, anaerobe, Gram-positive
description: Finegoldia magna CCUG 59495 is an anaerobe, Gram-positive bacterium that was isolated from Human vagina.
NCBI tax id
- NCBI tax id: 1260
- Matching level: species
doi: 10.13145/bacdive155874.20240916.9.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/bacillota
- domain: Bacteria
- phylum: Bacillota
- class: Clostridia
- order: Eubacteriales
- family: Peptoniphilaceae
- genus: Finegoldia
- species: Finegoldia magna
- full scientific name: Finegoldia magna (Prévot 1933) Murdoch and Shah 2000
synonyms
@ref synonym 20215 Diplococcus magnus 20215 Peptostreptococcus magnus 20215 Peptococcus magnus
@ref: 61998
domain: Bacteria
phylum: Firmicutes
class: Clostridia
order: Eubacteriales
family: Peptoniphilaceae
genus: Finegoldia
species: Finegoldia magna
type strain: no
Culture and growth conditions
culture temp
- @ref: 61998
- growth: positive
- type: growth
- temperature: 37
Physiology and metabolism
oxygen tolerance
| @ref | oxygen tolerance | confidence |
|---|---|---|
| 61998 | anaerobe | |
| 69480 | anaerobe | 93.901 |
spore formation
- @ref: 69481
- spore formation: no
- confidence: 99
Isolation, sampling and environmental information
isolation
- @ref: 61998
- sample type: Human vagina
- sampling date: 2007
- country: Belgium
- origin.country: BEL
- continent: Europe
isolation source categories
| Cat1 | Cat2 | Cat3 |
|---|---|---|
| #Host Body-Site | #Urogenital tract | #Vagina |
| #Host | #Human | #Female |
Sequence information
Genome sequences
- @ref: 66792
- description: Finegoldia magna ACS-171-V-Col3
- accession: 768713.4
- assembly level: wgs
- database: patric
- NCBI tax ID: 768713
Genome-based predictions
predictions
| @ref | trait | model | description | prediction | confidence | training_data |
|---|---|---|---|---|---|---|
| 69481 | spore-forming | spore-forming | Ability to form endo- or exospores | no | 99 | no |
| 69480 | gram-positive | gram-positive | Positive reaction to Gram-staining | yes | 84.82 | no |
| 69480 | anaerobic | anaerobic | Ability to grow under anoxygenic conditions (including facultative anaerobes) | yes | 93.901 | no |
| 69480 | aerobic | aerobic | Ability to grow under oxygenic conditions (including facultative aerobes) | no | 97.973 | no |
| 69480 | spore-forming | spore-forming | Ability to form endo- or exospores | no | 69.611 | no |
| 69480 | thermophilic | thermophile | Ability to grow at temperatures above or equal to 45°C | no | 96.235 | yes |
| 69480 | flagellated | motile2+ | Ability to perform flagellated movement | no | 88.434 | no |
External links
@ref: 61998
culture collection no.: CCUG 59495
straininfo link
- @ref: 109240
- straininfo: 408978
Reference
| @id | authors | title | doi/url | catalogue |
|---|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | |
| 61998 | Curators of the CCUG | https://www.ccug.se/strain?id=59495 | Culture Collection University of Gothenburg (CCUG) (CCUG 59495) | |
| 66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | https://diaspora-project.de/progress.html#genomes | |
| 69480 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | https://diaspora-project.de/progress.html#genomes | |
| 69481 | Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch | Predictions based on the model GenomeNet Sporulation v. 1 | 10.21203/rs.3.rs-2527258/v1 | |
| 109240 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | StrainInfo: A central database for resolving microbial strain identifiers | 10.60712/SI-ID408978.1 |