Strain identifier
version 8.1 (current version)
General
@ref: 61998
BacDive-ID: 155874
keywords: genome sequence, Bacteria, anaerobe, mesophilic, Gram-positive
description: Finegoldia magna CCUG 59495 is an anaerobe, mesophilic, Gram-positive bacterium that was isolated from Human vagina.
NCBI tax id
- NCBI tax id: 1260
- Matching level: species
doi: 10.13145/bacdive155874.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/bacillota
- domain: Bacteria
- phylum: Bacillota
- class: Clostridia
- order: Eubacteriales
- family: Peptoniphilaceae
- genus: Finegoldia
- species: Finegoldia magna
- full scientific name: Finegoldia magna (Prévot 1933) Murdoch and Shah 2000
synonyms
@ref synonym 20215 Diplococcus magnus 20215 Peptostreptococcus magnus 20215 Peptococcus magnus
@ref: 61998
domain: Bacteria
phylum: Firmicutes
class: Clostridia
order: Eubacteriales
family: Peptoniphilaceae
genus: Finegoldia
species: Finegoldia magna
type strain: no
Morphology
cell morphology
- @ref: 69480
- gram stain: positive
- confidence: 99.999
Culture and growth conditions
culture temp
- @ref: 61998
- growth: positive
- type: growth
- temperature: 37
- range: mesophilic
Physiology and metabolism
oxygen tolerance
| @ref | oxygen tolerance | confidence |
|---|---|---|
| 61998 | anaerobe | |
| 69480 | anaerobe | 99.598 |
spore formation
| @ref | spore formation | confidence |
|---|---|---|
| 69480 | no | 99.986 |
| 69481 | no | 99 |
Isolation, sampling and environmental information
isolation
- @ref: 61998
- sample type: Human vagina
- sampling date: 2007
- country: Belgium
- origin.country: BEL
- continent: Europe
isolation source categories
| Cat1 | Cat2 | Cat3 |
|---|---|---|
| #Host Body-Site | #Urogenital tract | #Vagina |
| #Host | #Human | #Female |
Sequence information
Genome sequences
- @ref: 66792
- description: Finegoldia magna ACS-171-V-Col3
- accession: 768713.4
- assembly level: wgs
- database: patric
- NCBI tax ID: 768713
Genome-based predictions
predictions
| trait | prediction | confidence | training_data |
|---|---|---|---|
| spore-forming | no | 99 | no |
| motile | no | 93.081 | no |
| flagellated | no | 97.899 | no |
| gram-positive | yes | 95.25 | no |
| anaerobic | yes | 99.39 | yes |
| halophile | no | 65.337 | no |
| spore-forming | no | 90.339 | no |
| glucose-util | yes | 80.774 | no |
| aerobic | no | 98.359 | yes |
| thermophile | no | 95.727 | no |
| glucose-ferment | yes | 67.834 | no |
External links
@ref: 61998
culture collection no.: CCUG 59495
straininfo link
- @ref: 109240
- straininfo: 408978
Reference
| @id | authors | title | doi/url | catalogue |
|---|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | |
| 61998 | Curators of the CCUG | https://www.ccug.se/strain?id=59495 | Culture Collection University of Gothenburg (CCUG) (CCUG 59495) | |
| 66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | https://diaspora-project.de/progress.html#genomes | |
| 69480 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | https://diaspora-project.de/progress.html#genomes | |
| 69481 | Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch | Predictions based on the model GenomeNet Sporulation v. 1 | 10.21203/rs.3.rs-2527258/v1 | |
| 109240 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | StrainInfo: A central database for resolving microbial strain identifiers | 10.60712/SI-ID408978.1 |