Strain identifier
BacDive ID: 155858
Type strain: 
Species: Lactobacillus delbrueckii subsp. bulgaricus
NCBI tax ID(s): 1585 (subspecies)
version 9.1 (current version)
General
@ref: 61982
BacDive-ID: 155858
keywords: genome sequence, Bacteria, anaerobe, Gram-positive
description: Lactobacillus delbrueckii subsp. bulgaricus CCUG 59479 is an anaerobe, Gram-positive bacterium that was isolated from Human vagina.
NCBI tax id
- NCBI tax id: 1585
- Matching level: subspecies
doi: 10.13145/bacdive155858.20240916.9.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/bacillota
- domain: Bacteria
- phylum: Bacillota
- class: Bacilli
- order: Lactobacillales
- family: Lactobacillaceae
- genus: Lactobacillus
- species: Lactobacillus delbrueckii subsp. bulgaricus
- full scientific name: Lactobacillus delbrueckii subsp. bulgaricus (Orla-Jensen 1919) Weiss et al. 1984
synonyms
@ref synonym 20215 Lactobacillus bulgaricus 20215 Thermobacterium bulgaricum
@ref: 61982
domain: Bacteria
phylum: Firmicutes
class: Bacilli
order: Lactobacillales
family: Lactobacillaceae
genus: Lactobacillus
species: Lactobacillus delbrueckii subsp. bulgaricus
type strain: no
Morphology
cell morphology
| @ref | gram stain | confidence | motility |
|---|---|---|---|
| 69480 | positive | 93.905 | |
| 69480 | 95.5 | no |
Culture and growth conditions
culture temp
- @ref: 61982
- growth: positive
- type: growth
- temperature: 37
Physiology and metabolism
oxygen tolerance
- @ref: 61982
- oxygen tolerance: anaerobe
spore formation
- @ref: 69481
- spore formation: no
- confidence: 100
Isolation, sampling and environmental information
isolation
- @ref: 61982
- sample type: Human vagina
- sampling date: 2003
- country: Belgium
- origin.country: BEL
- continent: Europe
isolation source categories
| Cat1 | Cat2 | Cat3 |
|---|---|---|
| #Host Body-Site | #Urogenital tract | #Vagina |
| #Host | #Human | #Female |
Sequence information
Genome sequences
- @ref: 66792
- description: Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4
- accession: 784613.4
- assembly level: wgs
- database: patric
- NCBI tax ID: 784613
Genome-based predictions
predictions
| @ref | trait | model | description | prediction | confidence | training_data |
|---|---|---|---|---|---|---|
| 69481 | spore-forming | spore-forming | Ability to form endo- or exospores | no | 100 | no |
| 69480 | gram-positive | gram-positive | Positive reaction to Gram-staining | yes | 93.905 | no |
| 69480 | anaerobic | anaerobic | Ability to grow under anoxygenic conditions (including facultative anaerobes) | no | 77.668 | no |
| 69480 | aerobic | aerobic | Ability to grow under oxygenic conditions (including facultative aerobes) | no | 97.272 | no |
| 69480 | spore-forming | spore-forming | Ability to form endo- or exospores | no | 89.115 | no |
| 69480 | thermophilic | thermophile | Ability to grow at temperatures above or equal to 45°C | no | 96 | yes |
| 69480 | flagellated | motile2+ | Ability to perform flagellated movement | no | 95.5 | no |
External links
@ref: 61982
culture collection no.: CCUG 59479
straininfo link
- @ref: 109226
- straininfo: 410519
Reference
| @id | authors | title | doi/url | catalogue |
|---|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | |
| 61982 | Curators of the CCUG | https://www.ccug.se/strain?id=59479 | Culture Collection University of Gothenburg (CCUG) (CCUG 59479) | |
| 66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | https://diaspora-project.de/progress.html#genomes | |
| 69480 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | https://diaspora-project.de/progress.html#genomes | |
| 69481 | Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch | Predictions based on the model GenomeNet Sporulation v. 1 | 10.21203/rs.3.rs-2527258/v1 | |
| 109226 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | StrainInfo: A central database for resolving microbial strain identifiers | 10.60712/SI-ID410519.1 |