Strain identifier
BacDive ID: 15582
Type strain: 
Species: Streptomyces scabiei
Strain history: <- R. E. Gordon, IMRU <- S. A. Waksman <- Shapovalov, Morse's strain (17)
NCBI tax ID(s): 1930 (species)
General
@ref: 9946
BacDive-ID: 15582
DSM-Number: 41005
keywords: 16S sequence, Bacteria, mesophilic, plant pathogen
description: Streptomyces scabiei DSM 41005 is a mesophilic plant pathogen of the family Streptomycetaceae.
NCBI tax id
- NCBI tax id: 1930
- Matching level: species
strain history
- @ref: 9946
- history: <- R. E. Gordon, IMRU <- S. A. Waksman <- Shapovalov, Morse's strain (17)
doi: 10.13145/bacdive15582.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/actinomycetota
- domain: Bacteria
- phylum: Actinomycetota
- class: Actinomycetes
- order: Kitasatosporales
- family: Streptomycetaceae
- genus: Streptomyces
- species: Streptomyces scabiei
- full scientific name: Streptomyces scabiei corrig. (ex Thaxter 1891) Lambert and Loria 1989
synonyms
- @ref: 20215
- synonym: Streptomyces scabies
@ref: 9946
domain: Bacteria
phylum: Actinobacteria
class: Actinobacteria
order: Actinomycetales
family: Streptomycetaceae
genus: Streptomyces
species: Streptomyces scabiei
full scientific name: Streptomyces scabiei (ex Thaxter 1891) Lambert and Loria 1989
type strain: no
Culture and growth conditions
culture medium
| @ref | name | growth | link | composition |
|---|---|---|---|---|
| 9946 | GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) | yes | https://mediadive.dsmz.de/medium/65 | Name: GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) Composition: Agar 18.0 g/l Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l CaCO3 2.0 g/l Distilled water |
| 9946 | STARCH - MINERAL SALT - AGAR (STMS) (DSMZ Medium 252) | yes | https://www.dsmz.de/microorganisms/medium/pdf/DSMZ_Medium252.pdf |
culture temp
- @ref: 9946
- growth: positive
- type: growth
- temperature: 28
- range: mesophilic
Safety information
risk assessment
- @ref: 9946
- pathogenicity plant: yes
- biosafety level: 1
- biosafety level comment: Risk group (German classification)
Sequence information
16S sequences
- @ref: 20218
- description: Streptomyces scabiei strain DSM 41005 clone ITS 16S-23S ribosomal RNA intergenic spacer, partial sequence
- accession: AY296971
- length: 270
- database: ena
- NCBI tax ID: 1930
External links
@ref: 9946
culture collection no.: DSM 41005, IMRU 3029
straininfo link
- @ref: 84669
- straininfo: 49862
Reference
| @id | authors | catalogue | doi/url | title | journal | pubmed |
|---|---|---|---|---|---|---|
| 9946 | Curators of the DSMZ | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 41005) | https://www.dsmz.de/collection/catalogue/details/culture/DSM-41005 | |||
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | 10.1099/ijsem.0.004332 | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | |||
| 20218 | Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P. | 10.1016/j.syapm.2013.11.002 | StrainInfo introduces electronic passports for microorganisms. | Syst Appl Microbiol. 37: 42-50 2014 | 24321274 | |
| 84669 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | 10.60712/SI-ID49862.1 | StrainInfo: A central database for resolving microbial strain identifiers |